RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 SENP1Q9P0U3 644 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 APEX2Q9UBZ4 518 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 DDX25Q9UHL0 483 aaKnown RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 RPL13P26373 211 aaKnown RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 IL6STP40189 918 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 ADCY7P51828 1080 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 CDC16Q13042 620 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 CBWD6Q4V339 395 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 CBWD3Q5JTY5 395 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 CBWD5Q5RIA9 395 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 SYT2Q8N9I0 419 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 PPP2R3CQ969Q6 453 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 PRR11Q96HE9 360 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 SETDB2Q96T68 719 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 HERPUD2Q9BSE4 406 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 TRABDQ9H4I3 376 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 TRPC5Q9UL62 973 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 PCDHA12Q9UN75 941 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 ATRNL1Q5VV63 1379 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 TMEM221A6NGB7 291 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 FOXN3O00409 490 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 EML1O00423 815 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 STRNO43815 780 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 NTSR2O95665 410 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 IL1BP01584 269 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 TSPY3P0CV98 308 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 TSPY8P0CW00 308 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 DLATP10515 647 aaKnown RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 VAV1P15498 845 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 RFX1P22670 979 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 RRM1P23921 792 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 MAN1A1P33908 653 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 TMED2Q15363 201 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 PKN2Q16513 984 aaKnown RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 TBC1D9BQ66K14 1250 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 IZUMO2Q6UXV1 221 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 NET1Q7Z628 596 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 ALDH16A1Q8IZ83 802 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 ZNF513Q8N8E2 541 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 DTX3LQ8TDB6 740 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 PCDHB18PQ96TA0 734 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 REEP2Q9BRK0 252 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 MKNK1Q9BUB5 465 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 DCLK3Q9C098 648 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 NPHS2Q9NP85 383 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 ANKFY1Q9P2R3 1169 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 ANGPTL2Q9UKU9 493 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 ATF5Q9Y2D1 282 aaPredicted RBP8.28□□□□□ -1.08
CD46-201ENST00000322875 NFASCO94856 1347 aa8.28□□□□□ -1.08
CD46-201ENST00000322875 SMIM31A0A1B0GVY4 71 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 A6NJR5 290 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 GYG2O15488 501 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 TMCC1O94876 653 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 HAUS5O94927 633 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 TGDSO95455 350 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 ETS2P15036 469 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 HPCAP84074 193 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 KCNA1Q09470 495 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 PPP2R5CQ13362 524 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 THOC5Q13769 683 aaKnown RBP8.27□□□□□ -1.09
CD46-201ENST00000322875 ITGA9Q13797 1035 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 ZNF804AQ7Z570 1209 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 HIC2Q96JB3 615 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 FOXP3Q9BZS1 431 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 MKNK2Q9HBH9 465 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 DNAJC17Q9NVM6 304 aaKnown RBP8.27□□□□□ -1.09
CD46-201ENST00000322875 DMAC2Q9NW81 257 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 ANAPC5Q9UJX4 755 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 A0A0J9YVX5 310 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 CAPN14A8MX76 684 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 F5H6K3 240 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 VILLO15195 856 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 CLDN3O15551 220 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 ATP6V1G1O75348 118 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 GZMAP12544 262 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 IL2RBP14784 551 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 KLRC2P26717 231 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 PRDX5P30044 214 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 MAGEA10P43363 369 aaPredicted RBP8.27□□□□□ -1.09
CD46-201ENST00000322875 ACTR3P61158 418 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 RPL26P61254 145 aaKnown RBP8.27□□□□□ -1.09
CD46-201ENST00000322875 KLF1Q13351 362 aaPredicted RBP8.27□□□□□ -1.09
CD46-201ENST00000322875 MESDQ14696 234 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 TCERG1LQ5VWI1 586 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 ZNF365Q70YC5 407 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 LRRC43Q8N309 656 aa8.27□□□□□ -1.09
CD46-201ENST00000322875 ZCCHC9Q8N567 271 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms