RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RAD54LQ92698 747 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PHACTR1Q9C0D0 580 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 TRPC7Q9HCX4 862 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 GJB4Q9NTQ9 266 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PLAGL2Q9UPG8 496 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 GLI1P08151 1106 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 FLCNQ8NFG4 579 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 ZFAND2BQ8WV99 257 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 STK33Q9BYT3 514 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 UTYO14607 1347 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 WDR64B1ANS9 1081 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 SMNDC1O75940 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KRT7P08729 469 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 DNAJC3Q13217 504 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 LRRC41Q15345 812 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 SNX30Q5VWJ9 437 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF662Q6ZS27 426 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 CATSPER3Q86XQ3 398 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 ACCSQ96QU6 501 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 C7orf25Q9BPX7 421 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 SUN2Q9UH99 717 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 AURKCQ9UQB9 309 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 FOXN1O15353 648 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 CHN2P52757 468 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 RAB14P61106 215 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 TAP1Q03518 808 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 MDH1BQ5I0G3 518 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 MTDHQ86UE4 582 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 RHPN2Q8IUC4 686 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 OSBP2Q969R2 916 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 DDX18Q9NVP1 670 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 RPL26L1Q9UNX3 145 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 COPG1Q9Y678 874 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 ZHX2Q9Y6X8 837 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 C5P01031 1676 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 B2RBV5 119 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 BTKQ06187 659 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PARP10Q53GL7 1025 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 NCAPG2Q86XI2 1143 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KAT2BQ92831 832 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 APBB2Q92870 758 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 DIP2CQ9Y2E4 1556 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 IGSF1Q8N6C5 1336 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PVALEFA0A1B0GWK0 134 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PPP1R3GB7ZBB8 358 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 F8VZ95 297 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 RHOBTB3O94955 611 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KRT76Q01546 638 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF211Q13398 564 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KNOP1Q1ED39 458 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 CCDC153Q494R4 210 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 RHOT1Q8IXI2 618 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 VPS50Q96JG6 964 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 MYLK2Q9H1R3 596 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 TEKT2Q9UIF3 430 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 FRMPD2Q68DX3 1309 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 AKAP10O43572 662 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 C21orf59P57076 290 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 USPL1Q5W0Q7 1092 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ANKRD40Q6AI12 368 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 C1orf228Q6PIY5 440 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ABHD8Q96I13 439 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 NDNQ99608 321 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 CCDC90BQ9GZT6 254 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 SNX25Q9H3E2 840 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TTC7AQ9ULT0 858 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 CDYLQ9Y232 598 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ERCC6L2Q5T890 1561 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 HERVK_113P62684 666 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 MTFR1Q15390 333 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 RGS21Q2M5E4 152 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ERMARDQ5T6L9 678 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 DCLK2Q8N568 766 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 SKA1Q96BD8 255 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 CNOT7Q9UIV1 285 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 FAM25AB3EWG3 89 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 FAM25CB3EWG5 89 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 FAM25GB3EWG6 89 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 PRPSAP2O60256 369 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TNNC2P02585 160 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ST13P50502 369 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 RASA2Q15283 850 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TMEM63BQ5T3F8 832 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TATDN2Q93075 761 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 BHMT2Q9H2M3 363 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 PKD2L1Q9P0L9 805 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 NEU2Q9Y3R4 380 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 COQ9O75208 318 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 SEC24DO94855 1032 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 PLOD1Q02809 727 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 PPIDQ08752 370 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 DRAP1Q14919 205 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 GPATCH4Q5T3I0 446 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 RNF34Q969K3 372 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TMEM237Q96Q45 408 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms