RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 APPL2Q8NEU8 664 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 SLC7A14Q8TBB6 771 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
TPM1-203ENST00000317516 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 MYADMQ96S97 322 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 FBXL21Q9UKT6 434 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 POLIQ9UNA4 740 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 DUSP12Q9UNI6 340 aa19.36■□□□□ 0.69
TPM1-203ENST00000317516 PIGRP01833 764 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 POU2F2P09086 479 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 CXCL8P10145 99 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 LAMP2P13473 410 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 MCM4P33991 863 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 PPP2R3AQ06190 1150 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 SPECC1Q5M775 1068 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 VARS2Q5ST30 1063 aaKnown RBP19.35■□□□□ 0.69
TPM1-203ENST00000317516 RRAGBQ5VZM2 374 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 SLC8B1Q6J4K2 584 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 GET4Q7L5D6 327 aaPredicted RBP19.35■□□□□ 0.69
TPM1-203ENST00000317516 GRASPQ7Z6J2 395 aaPredicted RBP19.35■□□□□ 0.69
TPM1-203ENST00000317516 ZNF461Q8TAF7 563 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 KIF12Q96FN5 646 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 SMOC2Q9H3U7 446 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 RPF1Q9H9Y2 349 aaKnown RBP19.35■□□□□ 0.69
TPM1-203ENST00000317516 FBXO2Q9UK22 296 aaPredicted RBP19.35■□□□□ 0.69
TPM1-203ENST00000317516 TRIOO75962 3097 aa19.35■□□□□ 0.69
TPM1-203ENST00000317516 ZDBF2Q9HCK1 2354 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 TTC26A0AVF1 554 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 OGTO15294 1046 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 CCL16O15467 120 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 PDGFBP01127 241 aaPredicted RBP19.34■□□□□ 0.69
TPM1-203ENST00000317516 CYP3A5P20815 502 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 VCPP55072 806 aaKnown RBP19.34■□□□□ 0.69
TPM1-203ENST00000317516 GTF2BQ00403 316 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 CEBPZQ03701 1054 aaKnown RBP19.34■□□□□ 0.69
TPM1-203ENST00000317516 CD302Q8IX05 232 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 SLC44A3Q8N4M1 653 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 LRRC15Q8TF66 581 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 SUSD3Q96L08 255 aa19.34■□□□□ 0.69
TPM1-203ENST00000317516 UBQLN1Q9UMX0 589 aaKnown RBP19.34■□□□□ 0.69
TPM1-203ENST00000317516 A0A0B4J269 797 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 MEFVO15553 781 aaPredicted RBP19.33■□□□□ 0.68
TPM1-203ENST00000317516 STX6O43752 255 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 CLCN5P51795 746 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 ASTLQ6HA08 431 aaPredicted RBP19.33■□□□□ 0.68
TPM1-203ENST00000317516 SLFN12LQ6IEE8 588 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 FAM173BQ6P4H8 233 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 RSPO2Q6UXX9 243 aaPredicted RBP19.33■□□□□ 0.68
TPM1-203ENST00000317516 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 SV2BQ7L1I2 683 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 MSTO1Q9BUK6 570 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 HAPLN2Q9GZV7 340 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 ST6GALNAC4Q9H4F1 302 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 FOXD4L1Q9NU39 408 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 WNT16Q9UBV4 365 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 CDH7Q9ULB5 785 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 MTMR6Q9Y217 621 aa19.33■□□□□ 0.68
TPM1-203ENST00000317516 MORC2Q9Y6X9 1032 aaPredicted RBP19.33■□□□□ 0.68
TPM1-203ENST00000317516 LACTBL1A8MY62 500 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 PDIA4P13667 645 aaKnown RBP19.32■□□□□ 0.68
TPM1-203ENST00000317516 NMT1P30419 496 aaKnown RBP19.32■□□□□ 0.68
TPM1-203ENST00000317516 LRPAP1P30533 357 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 ARPP19P56211 112 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 ROR1Q01973 937 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 MRPL58Q14197 206 aaKnown RBP19.32■□□□□ 0.68
TPM1-203ENST00000317516 SLC39A14Q15043 492 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 CTXN3Q4LDR2 81 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 TPGS2Q68CL5 300 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 ZNF280DQ6N043 979 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 USP49Q70CQ1 688 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 DYMQ7RTS9 669 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 MAP4K3Q8IVH8 894 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 PRSS33Q8NF86 280 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 RSAD2Q8WXG1 361 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 CLIC6Q96NY7 704 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 OXCT2Q9BYC2 517 aaPredicted RBP19.32■□□□□ 0.68
TPM1-203ENST00000317516 SEL1LQ9UBV2 794 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 TUBGCP4Q9UGJ1 667 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 KCNH3Q9ULD8 1083 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 MAFFQ9ULX9 164 aa19.32■□□□□ 0.68
TPM1-203ENST00000317516 ANHXE9PGG2 379 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 PRRG1O14668 218 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 TBC1D4O60343 1298 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 ABLIM3O94929 683 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 LRG1P02750 347 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 SRFP11831 508 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 ATF2P15336 505 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 PAX3P23760 479 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 TNFSF9P41273 254 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 SPAG1Q07617 926 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 ENOX2Q16206 610 aaKnown RBP19.31■□□□□ 0.68
TPM1-203ENST00000317516 PABPC1LQ4VXU2 614 aaKnown RBP19.31■□□□□ 0.68
TPM1-203ENST00000317516 ZNF720Q7Z2F6 126 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 ALYREFQ86V81 257 aaKnown RBP19.31■□□□□ 0.68
TPM1-203ENST00000317516 FLCNQ8NFG4 579 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 DDX12PQ92771 950 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 FAM212AQ96EL1 285 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 FBXL5Q9UKA1 691 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms