RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 DDX3YO15523 660 aaKnown RBP15.21■□□□□ 0.02
VRK3-201ENST00000316763 RTN2O75298 545 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 FTLP02792 175 aaPredicted RBP15.21■□□□□ 0.02
VRK3-201ENST00000316763 GLRA2P23416 452 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 ABCD1P33897 745 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 USP8P40818 1118 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 GPC5P78333 572 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 DGKDQ16760 1214 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 C1orf220Q5T0J3 134 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 LRIG3Q6UXM1 1119 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 RPUSD2Q8IZ73 545 aaKnown RBP15.21■□□□□ 0.02
VRK3-201ENST00000316763 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.02
VRK3-201ENST00000316763 ASAP3Q8TDY4 903 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 ARHGEF26Q96DR7 871 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 DDX47Q9H0S4 455 aaKnown RBP15.21■□□□□ 0.02
VRK3-201ENST00000316763 FAM114A2Q9NRY5 505 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 CTTNBP2NLQ9P2B4 639 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 TRPC6Q9Y210 931 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 UTP11Q9Y3A2 253 aaKnown RBP15.21■□□□□ 0.02
VRK3-201ENST00000316763 Q9Y3F1 56 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 DENND3A2RUS2 1198 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 MIF4GDA9UHW6 222 aaKnown RBP15.2■□□□□ 0.02
VRK3-201ENST00000316763 H0YCG3 227 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 DYNC1LI2O43237 492 aaPredicted RBP15.2■□□□□ 0.02
VRK3-201ENST00000316763 FGGP02679 453 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 GZMAP12544 262 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 NAMPTP43490 491 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
VRK3-201ENST00000316763 KRT39Q6A163 491 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 C11orf63Q6NUN7 778 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 UBL4BQ8N7F7 174 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 TMC2Q8TDI7 906 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 SLC20A1Q8WUM9 679 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 ARL8AQ96BM9 186 aa15.2■□□□□ 0.02
VRK3-201ENST00000316763 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 GOLGA6L10A6NI86 522 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 H3BRB1 525 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 DUSP11O75319 330 aaKnown RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 MYCP01106 439 aaPredicted RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 ZNF286BP0CG31 522 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 GTF2H1P32780 548 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 IRX5P78411 483 aaPredicted RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 SKOR1P84550 965 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 MTFR1Q15390 333 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 TTMPQ5BVD1 217 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 IER5Q5VY09 327 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 TAS1R3Q7RTX0 852 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 FAM71AQ8IYT1 594 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 JPH2Q9BR39 696 aaPredicted RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 RAB17Q9H0T7 212 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 TUT1Q9H6E5 874 aaKnown RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 TMEM8AQ9HCN3 771 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 ADRB2P07550 413 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 ITGA4P13612 1032 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 IRAK1P51617 712 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 DRP2Q13474 957 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 TLK2Q86UE8 772 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 PLEKHO2Q8TD55 490 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 TCP11Q8WWU5 503 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 UNC93B1Q9H1C4 597 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
VRK3-201ENST00000316763 AMACRQ9UHK6 382 aa15.19■□□□□ 0.02
VRK3-201ENST00000316763 COL1A2P08123 1366 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 C22orf31O95567 290 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 RARBP10826 455 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 INSRRP14616 1297 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 ENPEPQ07075 957 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 TRADDQ15628 312 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 PALB2Q86YC2 1186 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 CBWD2Q8IUF1 395 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 PARD3BQ8TEW8 1205 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 PRPF31Q8WWY3 499 aaKnown RBP15.18■□□□□ 0.02
VRK3-201ENST00000316763 PIK3R5Q8WYR1 880 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 NT5C1BQ96P26 610 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 AP5M1Q9H0R1 490 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 PLAAQ9Y263 795 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 COQ4Q9Y3A0 265 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 ALG6Q9Y672 507 aa15.18■□□□□ 0.02
VRK3-201ENST00000316763 HMGB1P1B2RPK0 211 aaPredicted RBP15.17■□□□□ 0.02
VRK3-201ENST00000316763 TULP1O00294 542 aaPredicted RBP15.17■□□□□ 0.02
VRK3-201ENST00000316763 ERLIN2O94905 339 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 SGPL1O95470 568 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 KRT14P02533 472 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 CCL5P13501 91 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 GPC3P51654 580 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms