RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SKIV2L2P42285 1042 aaKnown RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 DGKZQ13574 1117 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 GRB14Q14449 540 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 MMS22LQ6ZRQ5 1243 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 KIAA0825Q8IV33 1275 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 TIPINQ9BVW5 301 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 BHMT2Q9H2M3 363 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 METTL14Q9HCE5 456 aaKnown RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 GOLGA6AQ9NYA3 693 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 GCNT4Q9P109 453 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 TDRD15B5MCY1 1934 aaKnown RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 HELZP42694 1942 aaKnown RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 BTBD19C9JJ37 291 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 NFIBO00712 420 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 MAGEA12P43365 314 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 SNAP25P60880 206 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 EXOC3L4Q17RC7 722 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 SPATS2Q86XZ4 545 aaKnown RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 ZNF444Q8N0Y2 327 aaPredicted RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 FITM2Q8N6M3 262 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 NEK9Q8TD19 979 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 SYTL5Q8TDW5 730 aaPredicted RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 CKAP2Q8WWK9 683 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 ISL2Q96A47 359 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 HINFPQ9BQA5 517 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 AMNQ9BXJ7 453 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 DPH5Q9H2P9 285 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 VRTNQ9H8Y1 702 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 KCNH7Q9NS40 1196 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 SLC5A4Q9NY91 659 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 FOXO6A8MYZ6 492 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 ANKRD65E5RJM6 399 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 BACH1O14867 736 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 CYP11B1P15538 503 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TAC1P20366 129 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 COPB2P35606 906 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TNNI2P48788 182 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 LMAN1P49257 510 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 PPP2R2AP63151 447 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 NOMO3P69849 1222 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TEX44Q53QW1 395 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 MIGA2Q7L4E1 593 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 C10orf82Q8WW14 230 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 OPTNQ96CV9 577 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 BCO2Q9BYV7 579 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 MKS1Q9NXB0 559 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 NAP1L2Q9ULW6 460 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 WDFY3Q8IZQ1 3526 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 HIP1RO75146 1068 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 WFS1O76024 890 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 GH1P01241 217 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 MMEP08473 750 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 IQCF3P0C7M6 154 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 L1CAMP32004 1257 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 COILP38432 576 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 CDR2Q01850 454 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 RNASEH2BQ5TBB1 312 aaKnown RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 OTUD1Q5VV17 481 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 FOXB2Q5VYV0 432 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TXNRD3NBQ6F5E7 133 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 SLC13A5Q86YT5 568 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 IFT20Q8IY31 132 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 KATNAL2Q8IYT4 538 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 RMDN2Q96LZ7 410 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 MIPEPQ99797 713 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 STX8Q9UNK0 236 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 MUC22E2RYF6 1773 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 COL4A3Q01955 1670 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TMEM150BA6NC51 233 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 ZC3H11AO75152 810 aaKnown RBP eCLIP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 ERLIN1O75477 346 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 FERP16591 822 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 CYP3A5P20815 502 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 ARRB2P32121 409 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 NEK3P51956 506 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TAS2R40P59535 323 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TDRD10Q5VZ19 366 aaKnown RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 DCAF15Q66K64 600 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 SLFN13Q68D06 897 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 VSIG10LQ86VR7 867 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 NAT8LQ8N9F0 302 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 POMGNT1Q8WZA1 660 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 CALML4Q96GE6 196 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 XPO6Q96QU8 1125 aaKnown RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 ZNF385DQ9H6B1 395 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 POLD4Q9HCU8 107 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 DNAJC12Q9UKB3 198 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 GTF3C4Q9UKN8 822 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 TPX2Q9ULW0 747 aaKnown RBP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 PTPN22Q9Y2R2 807 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 LRRC42Q9Y546 428 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 ASB3Q9Y575 518 aa8.41□□□□□ -1.06
CNOT4-201ENST00000315544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.41□□□□□ -1.06
CNOT4-201ENST00000315544 CACNB3P54284 484 aa8.4□□□□□ -1.06
CNOT4-201ENST00000315544 SETQ01105 290 aaPredicted RBP8.4□□□□□ -1.06
CNOT4-201ENST00000315544 CYP24A1Q07973 514 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms