RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GTF2BQ00403 316 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 CCDC15Q0P6D6 951 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 CEP120Q8N960 986 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 ZHX2Q9Y6X8 837 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 RASA4BC9J798 803 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 SLC16A4O15374 487 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 RASA4O43374 803 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 ITGB5P18084 799 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 ATP4AP20648 1035 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 ADSSP30520 456 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 RARRES1P49788 294 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 SNRNP35Q16560 246 aaKnown RBP14.3□□□□□ -0.12
SKA3-202ENST00000314759 CLEC16AQ2KHT3 1053 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 KRT39Q6A163 491 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 PPP1R21Q6ZMI0 780 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 TAS1R2Q8TE23 839 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 GRAMD1AQ96CP6 724 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
SKA3-202ENST00000314759 TMEM237Q96Q45 408 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 RIT2Q99578 217 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 ZNFX1Q9P2E3 1918 aaKnown RBP14.3□□□□□ -0.12
SKA3-202ENST00000314759 GM2AP17900 193 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 GNAZP19086 355 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 ANO7Q6IWH7 933 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 MAIP1Q8WWC4 291 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 MAML1Q92585 1016 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 MYLK2Q9H1R3 596 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 GPRC5CQ9NQ84 441 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 TOPORSQ9NS56 1045 aaPredicted RBP14.29□□□□□ -0.12
SKA3-202ENST00000314759 COQ4Q9Y3A0 265 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 ACTL7BQ9Y614 415 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 TMEM150BA6NC51 233 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
SKA3-202ENST00000314759 TOM1O60784 492 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 P4HBP07237 508 aaKnown RBP14.29□□□□□ -0.12
SKA3-202ENST00000314759 RALAP11233 206 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 GPC3P51654 580 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 KLF1Q13351 362 aaPredicted RBP14.29□□□□□ -0.12
SKA3-202ENST00000314759 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 PAIP2Q9BPZ3 127 aaKnown RBP14.29□□□□□ -0.12
SKA3-202ENST00000314759 MXRA8Q9BRK3 442 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 MRIQ9BWK5 157 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 LTBP4Q8N2S1 1624 aa14.29□□□□□ -0.12
SKA3-202ENST00000314759 FAM47DPA6NHR8 397 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 SPDYE5A6NIY4 337 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
SKA3-202ENST00000314759 PEX3P56589 373 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 MCCD1P59942 119 aaPredicted RBP14.28□□□□□ -0.12
SKA3-202ENST00000314759 IL9RQ01113 521 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 TRAF1Q13077 416 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 STAT4Q14765 748 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 C2CD6Q53TS8 623 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 KIFAP3Q92845 792 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 NT5C1BQ96P26 610 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 PDHA1P08559 390 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 UNGP13051 313 aaPredicted RBP14.28□□□□□ -0.12
SKA3-202ENST00000314759 TMED2Q15363 201 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 IZUMO3Q5VZ72 239 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 AP1ARQ63HQ0 302 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 CYP4F22Q6NT55 531 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
SKA3-202ENST00000314759 RELL1Q8IUW5 271 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 MCOLN2Q8IZK6 566 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 CPA5Q8WXQ8 436 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 CCDC77Q9BR77 488 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 KCNH7Q9NS40 1196 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 RAB20Q9NX57 234 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 ATRNL1Q5VV63 1379 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 SPAG7O75391 227 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 ASMTLO95671 621 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 POTEJP0CG39 1038 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 KRT5P13647 590 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 CENPCQ03188 943 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 DNAJC3Q13217 504 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 GNPTABQ3T906 1256 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
SKA3-202ENST00000314759 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 ERP27Q96DN0 273 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 RANBP17Q9H2T7 1088 aaKnown RBP14.28□□□□□ -0.12
SKA3-202ENST00000314759 ST6GALNAC4Q9H4F1 302 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 TMEM8AQ9HCN3 771 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 CHKBQ9Y259 395 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 STARD13Q9Y3M8 1113 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 LRRC42Q9Y546 428 aa14.28□□□□□ -0.12
SKA3-202ENST00000314759 DHX15O43143 795 aaKnown RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 PEX11AO75192 247 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 TARSP26639 723 aaKnown RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 GCAP28676 217 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 RAD23BP54727 409 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms