RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LDLRAD1Q5T700 205 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 GPRC5AQ8NFJ5 357 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 MPHOSPH6Q99547 160 aaKnown RBP13.29□□□□□ -0.28
RNF4-201ENST00000314289 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 VTNP04004 478 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 RRM1P23921 792 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 MYL6P60660 151 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 GCNT1Q02742 428 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 BCAS4Q8TDM0 211 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 NEUROG2Q9H2A3 272 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 MROH8Q9H579 483 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 KIAA1586Q9HCI6 787 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 EBAG9O00559 213 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 DAPK3O43293 454 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ERLIN2O94905 339 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 INSRRP14616 1297 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 IRAK1P51617 712 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 EPHB4P54760 987 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 GNGT1P63211 74 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 CUL2Q13617 745 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 IER5Q5VY09 327 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ACO2Q99798 780 aaKnown RBP13.28□□□□□ -0.28
RNF4-201ENST00000314289 C11orf70Q9BRQ4 267 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 MRPL4Q9BYD3 311 aaKnown RBP13.28□□□□□ -0.28
RNF4-201ENST00000314289 A0A087WUV0 522 aaPredicted RBP13.28□□□□□ -0.28
RNF4-201ENST00000314289 TOM1L1O75674 476 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ORC1Q13415 861 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 BRI3BPQ8WY22 251 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 CAPS2Q9BXY5 557 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ANAPC7Q9UJX3 599 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 FAM169AQ9Y6X4 670 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 KRT14P02533 472 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 PYGMP11217 842 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 GZMAP12544 262 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 FLT3P36888 993 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 CLDN10P78369 228 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
RNF4-201ENST00000314289 ACAD10Q6JQN1 1059 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ZBTB8OSQ8IWT0 167 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 ZDHHC14Q8IZN3 488 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 RASGEF1CQ8N431 466 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 CPB2Q96IY4 423 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
RNF4-201ENST00000314289 O00370 1275 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 THAP12O43422 761 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 FAM189A1O60320 539 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 PIGRP01833 764 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 KRT19P08727 400 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 ACO1P21399 889 aaKnown RBP13.27□□□□□ -0.28
RNF4-201ENST00000314289 GNA15P30679 374 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 GJC1P36383 396 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 TMEM62Q0P6H9 643 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 C18orf8Q96DM3 657 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 CCDC113Q9H0I3 377 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 SMARCAD1Q9H4L7 1026 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 TMEM134Q9H6X4 195 aa13.27□□□□□ -0.28
RNF4-201ENST00000314289 LGR5O75473 907 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 LDHAP00338 332 aaKnown RBP13.27□□□□□ -0.29
RNF4-201ENST00000314289 CXCL8P10145 99 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 SCP2P22307 547 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 FGFR4P22455 802 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 ARHGAP1Q07960 439 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 KCTD16Q68DU8 428 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 GPATCH11Q8N954 259 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 RBBP8NLQ8NC74 664 aaPredicted RBP13.27□□□□□ -0.29
RNF4-201ENST00000314289 ZSWIM1Q9BR11 485 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
RNF4-201ENST00000314289 AKT3Q9Y243 479 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
RNF4-201ENST00000314289 A0A087WZ62 844 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 LGALS2P05162 132 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 CLTAP09496 248 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 MXD4Q14582 209 aaPredicted RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 PRAMEF19Q5SWL8 479 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 ATF7IP2Q5U623 682 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 PLPPR4Q7Z2D5 763 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 DPP9Q86TI2 863 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 KAT2BQ92831 832 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 VTI1AQ96AJ9 217 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 DAAM1Q9Y4D1 1078 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 LRRC37A2A6NM11 1700 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 DOCK3Q8IZD9 2030 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 UNGP13051 313 aaPredicted RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 NSFP46459 744 aaKnown RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 RAP1GAPP47736 663 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms