RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 DSG1Q02413 1049 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 STIM1Q13586 685 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 NAB2Q15742 525 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 JADE1Q6IE81 842 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 GPR65Q8IYL9 337 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 XXYLT1Q8NBI6 393 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 AUTS2Q8WXX7 1259 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 C18orf25Q96B23 403 aaPredicted RBP21.49■■□□□ 1.03
VEGFB-201ENST00000309422 FNBP1Q96RU3 617 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 PAAF1Q9BRP4 392 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 PRRC2BQ5JSZ5 2229 aaKnown RBP21.49■■□□□ 1.03
VEGFB-201ENST00000309422 TRANK1O15050 2925 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 PLXNA4Q9HCM2 1894 aa21.49■■□□□ 1.03
VEGFB-201ENST00000309422 GOLGA8IPA6NC78 632 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 GOLGA8JA6NMD2 632 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 EXOC3O60645 756 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 TMEM191BP0C7N4 346 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 STK4Q13043 487 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 PNOCQ13519 176 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 TJAP1Q5JTD0 557 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 LLGL2Q6P1M3 1020 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 USP37Q86T82 979 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 KIAA0895Q8NCT3 520 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 ZNF560Q96MR9 790 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 GSDMAQ96QA5 445 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 CXCL16Q9H2A7 254 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 IKZF4Q9H2S9 585 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 PRDM6Q9NQX0 595 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 DZANK1Q9NVP4 752 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 F8W810 466 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 PRPF40AO75400 957 aaKnown RBP21.48■■□□□ 1.03
VEGFB-201ENST00000309422 NFICP08651 508 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 TFAMQ00059 246 aaKnown RBP21.48■■□□□ 1.03
VEGFB-201ENST00000309422 SOX4Q06945 474 aaPredicted RBP21.48■■□□□ 1.03
VEGFB-201ENST00000309422 SNW1Q13573 536 aaKnown RBP21.48■■□□□ 1.03
VEGFB-201ENST00000309422 APPL2Q8NEU8 664 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 ENGASEQ8NFI3 743 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 ANKRD36BP1Q96IX9 119 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 VN1R3Q9BXE9 311 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 GPR62Q9BZJ7 368 aa21.48■■□□□ 1.03
VEGFB-201ENST00000309422 H3BQ06 376 aaPredicted RBP21.47■■□□□ 1.03
VEGFB-201ENST00000309422 SYN3O14994 580 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 GLUD1P00367 558 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 TNNC2P02585 160 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 LRPAP1P30533 357 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 PSMD5Q16401 504 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 SNRNP35Q16560 246 aaKnown RBP21.47■■□□□ 1.03
VEGFB-201ENST00000309422 LEXMQ3ZCV2 418 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 SPATA1Q5VX52 437 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 DSTYKQ6XUX3 929 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 ANKS3Q6ZW76 656 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 ELOA2Q8IYF1 753 aaPredicted RBP21.47■■□□□ 1.03
VEGFB-201ENST00000309422 ASB2Q96Q27 587 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 CD207Q9UJ71 328 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 FRMD4BQ9Y2L6 1034 aa21.47■■□□□ 1.03
VEGFB-201ENST00000309422 TCHHQ07283 1943 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 H7C4K7 107 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 PDXKO00764 312 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 CLIC2O15247 247 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 CLASP2O75122 1294 aaKnown RBP21.46■■□□□ 1.03
VEGFB-201ENST00000309422 CLSTN1O94985 981 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 ADRB2P07550 413 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 HOXB8P17481 243 aaPredicted RBP21.46■■□□□ 1.03
VEGFB-201ENST00000309422 RPL13P26373 211 aaKnown RBP21.46■■□□□ 1.03
VEGFB-201ENST00000309422 GTF2F1P35269 517 aaKnown RBP eCLIP21.46■■□□□ 1.032e-11■■■■■ 47.2
VEGFB-201ENST00000309422 PPP1R2P41236 205 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 PNPLA4P41247 253 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 TFF2Q03403 129 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 ADAM15Q13444 863 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 CTC1Q2NKJ3 1217 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 C12orf56Q8IXR9 622 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 RNF168Q8IYW5 571 aaPredicted RBP21.46■■□□□ 1.03
VEGFB-201ENST00000309422 TSG101Q99816 390 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 TSHZ2Q9NRE2 1034 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 CHST7Q9NS84 486 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 DPP3Q9NY33 737 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 HCFC2Q9Y5Z7 792 aa21.46■■□□□ 1.03
VEGFB-201ENST00000309422 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.45■■□□□ 1.02
VEGFB-201ENST00000309422 TGFB1I1O43294 461 aa21.45■■□□□ 1.02
VEGFB-201ENST00000309422 GADD45BO75293 160 aaPredicted RBP21.45■■□□□ 1.02
VEGFB-201ENST00000309422 CNPP09543 421 aaKnown RBP21.45■■□□□ 1.02
VEGFB-201ENST00000309422 COL19A1Q14993 1142 aa21.45■■□□□ 1.02
VEGFB-201ENST00000309422 CES5AQ6NT32 575 aa21.45■■□□□ 1.02
VEGFB-201ENST00000309422 GUF1Q8N442 669 aaKnown RBP21.45■■□□□ 1.02
VEGFB-201ENST00000309422 PIK3R5Q8WYR1 880 aa21.45■■□□□ 1.02
VEGFB-201ENST00000309422 KLHL5Q96PQ7 755 aa21.45■■□□□ 1.02
VEGFB-201ENST00000309422 FNIP2Q9P278 1114 aa21.45■■□□□ 1.02
VEGFB-201ENST00000309422 BARX2Q9UMQ3 279 aaPredicted RBP21.45■■□□□ 1.02
VEGFB-201ENST00000309422 COL6A3P12111 3177 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 LINC01565O15544 149 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 TBX10O75333 385 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 ODC1P11926 461 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 TNNI1P19237 187 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 SMAD4Q13485 552 aaKnown RBP21.44■■□□□ 1.02
VEGFB-201ENST00000309422 CLUL1Q15846 466 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 SV2CQ496J9 727 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 RTP2Q5QGT7 225 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 ZNF658Q5TYW1 1059 aaPredicted RBP21.44■■□□□ 1.02
VEGFB-201ENST00000309422 KIAA0319Q5VV43 1072 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 PTCRAQ6ISU1 281 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms