RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CHRNA1P02708 482 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SERPING1P05155 500 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 CLTAP09496 248 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 CCDC175P0C221 793 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 RFX1P22670 979 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SOX5P35711 763 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 PIK3CAP42336 1068 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 BIRC3Q13489 604 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 PCBP1Q15365 356 aaKnown RBP eCLIP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 ARHGAP44Q17R89 818 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 TRIM71Q2Q1W2 868 aaKnown RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 TDRD12Q587J7 1177 aaKnown RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 UBXN11Q5T124 520 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SPOPLQ6IQ16 392 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 NOTUMQ6P988 496 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SLC27A1Q6PCB7 646 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 RPAINQ86UA6 219 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 VTI1AQ96AJ9 217 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 ADPGKQ9BRR6 497 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 TSEN34Q9BSV6 310 aaKnown RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SENP6Q9GZR1 1112 aaPredicted RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 CXCL16Q9H2A7 254 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 HAUS4Q9H6D7 363 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 APOBEC3GQ9HC16 384 aaKnown RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 EIF3CLB5ME19 914 aaKnown RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 FOXN3O00409 490 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ZSCAN12O43309 604 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 EVI5O60447 810 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 IL18RAPO95256 599 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 MYCP01106 439 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 NFICP08651 508 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 AXLP30530 894 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 CYLC1P35663 651 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 GRM5P41594 1212 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PRKCIP41743 596 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 STAT1P42224 750 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 KIF11P52732 1056 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 CYP27A1Q02318 531 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 KLHL30Q0D2K2 578 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 SURF1Q15526 300 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 DCAF4L1Q3SXM0 396 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 SLC9C1Q4G0N8 1177 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 JADE1Q6IE81 842 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 TRAPPC11Q7Z392 1133 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF571Q7Z3V5 609 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF710Q8N1W2 664 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PPM1KQ8N3J5 372 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 SLC43A3Q8NBI5 491 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 CCDC42Q96M95 316 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 GLT1D1Q96MS3 346 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 NT5C1BQ96P26 610 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 EIF3CQ99613 913 aaKnown RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 TFR2Q9UP52 801 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PHF24Q9UPV7 400 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PIN4Q9Y237 131 aaKnown RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 HES2Q9Y543 173 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 UMODL1Q5DID0 1318 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 MROH7Q68CQ1 1323 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 CCP110O43303 1012 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ZC3H11AO75152 810 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 LCA5LO95447 670 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 THPOP40225 353 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ARHGAP25P42331 645 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 TFAMQ00059 246 aaKnown RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 POU5F1Q01860 360 aaKnown RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PTK2Q05397 1052 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 GFPT1Q06210 699 aaPredicted RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 PTK7Q13308 1070 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 NCOA4Q13772 614 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 KYAT1Q16773 422 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 RSPH3Q86UC2 560 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 CXorf38Q8TB03 319 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 SHC3Q92529 594 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ASB2Q96Q27 587 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 ARID3AQ99856 593 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 NXF3Q9H4D5 531 aaKnown RBP7.5□□□□□ -1.21
PTCD2-201ENST00000308077 SNTG2Q9NY99 539 aa7.5□□□□□ -1.21
PTCD2-201ENST00000308077 SOBPA7XYQ1 873 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 M0QZ92 97 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 FANCGO15287 622 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 TMEM191BP0C7N4 346 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 FERP16591 822 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 AP3M2P53677 418 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 MFAP3P55082 362 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 MYL6P60660 151 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 NOP14P78316 857 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 GCNT1Q02742 428 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 NCBP1Q09161 790 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 PTPN14Q15678 1187 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 C1orf127Q8N9H9 656 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ARRDC4Q8NCT1 418 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 SMG8Q8ND04 991 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms