RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 EXOC7Q9UPT5 735 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 LPXNO60711 386 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
TRIM35-201ENST00000305364 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 SLC34A1Q06495 639 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 ZNF577Q9BSK1 485 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 OSBPL8Q9BZF1 889 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 PCDHA3Q9Y5H8 950 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 BASP1P80723 227 aaKnown RBP13.8□□□□□ -0.2
TRIM35-201ENST00000305364 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 INTS5Q6P9B9 1019 aaKnown RBP13.8□□□□□ -0.2
TRIM35-201ENST00000305364 CYP4X1Q8N118 509 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 NME8Q8N427 588 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 LRRC4BQ9NT99 713 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 PSMC3IPQ9P2W1 217 aaPredicted RBP13.8□□□□□ -0.2
TRIM35-201ENST00000305364 PEX11AO75192 247 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 RPA3P35244 121 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 POU5F1Q01860 360 aaKnown RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 WDR78Q5VTH9 848 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 CDCA2Q69YH5 1023 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 RGS9BPQ6ZS82 235 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 FAM43BQ6ZT52 329 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SLC47A2Q86VL8 602 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 UCMAQ8WVF2 138 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 CHKBQ9Y259 395 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 JAM2P57087 298 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 DEUP1Q05D60 604 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 TMED1Q13445 227 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 EAPPQ56P03 285 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 KAT5Q92993 513 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 HIC2Q96JB3 615 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SEL1LQ9UBV2 794 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 FOXN2P32314 431 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 ABL2P42684 1182 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 IRX4P78413 519 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 PCNX4Q63HM2 1172 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 IZUMO2Q6UXV1 221 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SPATA24Q86W54 205 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 RHOT1Q8IXI2 618 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 DTNBP1Q96EV8 351 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 BTBD10Q9BSF8 475 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 SP4Q02446 784 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 TRIM11Q96F44 468 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 OLFM3Q96PB7 478 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 TEKT3Q9BXF9 490 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
TRIM35-201ENST00000305364 MARCOQ9UEW3 520 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-201ENST00000305364 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 CCDC195A0A1B0GUA6 201 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 GSTT1P30711 240 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 RAB27AP51159 221 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 PPP4CP60510 307 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 LGSNQ5TDP6 509 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 PDIK1LQ8N165 341 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 SLC26A7Q8TE54 656 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 JDP2Q8WYK2 163 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 ZNF75CPQ92670 426 aaPredicted RBP13.78□□□□□ -0.2
TRIM35-201ENST00000305364 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 PIDD1Q9HB75 910 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 MRPL47Q9HD33 250 aaKnown RBP13.78□□□□□ -0.2
TRIM35-201ENST00000305364 PEX3P56589 373 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 GRIK5Q16478 980 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 GALNTL6Q49A17 601 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 KHDC1Q4VXA5 237 aaKnown RBP13.78□□□□□ -0.2
TRIM35-201ENST00000305364 GORASP1Q9BQQ3 440 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 RANBP17Q9H2T7 1088 aaKnown RBP13.78□□□□□ -0.2
TRIM35-201ENST00000305364 KLHL33A6NCF5 533 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 TJP3O95049 919 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 RRM1P23921 792 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 SERPINB3P29508 390 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 YARSP54577 528 aaKnown RBP13.78□□□□□ -0.2
TRIM35-201ENST00000305364 MED21Q13503 144 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 HIF1AQ16665 826 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 GALNT15Q8N3T1 639 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 MTBPQ96DY7 904 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 EPB41L4BQ9H329 900 aa13.78□□□□□ -0.2
TRIM35-201ENST00000305364 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms