RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SH3GLB2Q9NR46 395 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 CD274Q9NZQ7 290 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 TMEM150BA6NC51 233 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 ACO1P21399 889 aaKnown RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 TUBB4BP68371 445 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 STOX1Q6ZVD7 989 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 JMJD4Q9H9V9 463 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 ZFYVE1Q9HBF4 777 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 ERCC6L2Q5T890 1561 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 ARP10275 920 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 PTRHD1Q6GMV3 140 aaKnown RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 RRM2BQ7LG56 351 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 DHX40Q8IX18 779 aaKnown RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 SCUBE2Q9NQ36 999 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 DPP3Q9NY33 737 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 FBXO10Q9UK96 956 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 SPATA31A6Q5VVP1 1343 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 P4HA2O15460 535 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 CKBP12277 381 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 DDX39BQ13838 428 aaKnown RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 NAALADL2Q58DX5 795 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 ATPAF2Q8N5M1 289 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 CEP19Q96LK0 163 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 FMO2Q99518 471 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 SUN2Q9UH99 717 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 RASA4BC9J798 803 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 RASA4O43374 803 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 SUPT3HO75486 399 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 HMOX2P30519 316 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 LIFRP42702 1097 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 CXCL9Q07325 125 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 MB21D2Q8IYB1 491 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 SLC30A1Q9Y6M5 507 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 DDTLA6NHG4 134 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 F8W8V4 182 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 SH3BGRLO75368 114 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 APRTP07741 180 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 RBP5P82980 135 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 PDCLQ13371 301 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 CTXN3Q4LDR2 81 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 INTS5Q6P9B9 1019 aaKnown RBP8.22□□□□□ -1.09
SCN9A-201ENST00000303354 CROCCP2Q86T23 111 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 C10orf53Q8N6V4 93 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 MXRA8Q9BRK3 442 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 NDOR1Q9UHB4 597 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 MAGI3Q5TCQ9 1506 aa8.22□□□□□ -1.09
SCN9A-201ENST00000303354 KIF24Q5T7B8 1368 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 EFEMP1Q12805 493 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 TPGS1Q6ZTW0 290 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 PBKQ96KB5 322 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 KLF6Q99612 283 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-201ENST00000303354 COLEC11Q9BWP8 271 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 KCNH7Q9NS40 1196 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 ERAP1Q9NZ08 941 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 EPS15L1Q9UBC2 864 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 N6AMT1Q9Y5N5 214 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 PGK1P00558 417 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 ZBED6P86452 979 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 XKR3Q5GH77 459 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 CRLF3Q8IUI8 442 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 NEDD1Q8NHV4 660 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 MTFR1LQ9H019 292 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 GOLPH3Q9H4A6 298 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 NMRK2Q9NPI5 230 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 PARVAQ9NVD7 372 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 PIH1D1Q9NWS0 290 aaKnown RBP8.21□□□□□ -1.09
SCN9A-201ENST00000303354 BCAP29Q9UHQ4 241 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 CDC23Q9UJX2 597 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 SAMD9LQ8IVG5 1584 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 PMPCBO75439 489 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 NTSR2O95665 410 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 TCN1P20061 433 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-201ENST00000303354 NME5P56597 212 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 AGPAT1Q99943 283 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 DDX50Q9BQ39 737 aaKnown RBP8.21□□□□□ -1.09
SCN9A-201ENST00000303354 MOV10L1Q9BXT6 1211 aaKnown RBP8.21□□□□□ -1.09
SCN9A-201ENST00000303354 KIAA1586Q9HCI6 787 aa8.21□□□□□ -1.09
SCN9A-201ENST00000303354 PPIEQ9UNP9 301 aaKnown RBP8.21□□□□□ -1.09
SCN9A-201ENST00000303354 M0QYT0 321 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 RASA1P20936 1047 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 LRRC63Q05C16 580 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 FUT11Q495W5 492 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 BLOC1S5Q8TDH9 187 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 CEP41Q9BYV8 373 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 ATXN3LQ9H3M9 355 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 NDUFS3O75489 264 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 DGKIO75912 1065 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 KLRC1P26715 233 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 ACTR2P61160 394 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 BTG3Q14201 252 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-201ENST00000303354 STYK1Q6J9G0 422 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 FLCNQ8NFG4 579 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 ABCB6Q9NP58 842 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 A0A087WZ62 844 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 ADCYAP1R1P41586 468 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 SV2CQ496J9 727 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 LAYNQ6UX15 382 aa8.21□□□□□ -1.1
SCN9A-201ENST00000303354 RAB42Q8N4Z0 105 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms