RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 AFAP1L1Q8TED9 768 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 UPF1Q92900 1129 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAG1-201ENST00000299440 WNK4Q96J92 1243 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 AP1M1Q9BXS5 423 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 MRPL9Q9BYD2 267 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 KLHL11Q9NVR0 708 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 NEXMIFQ5QGS0 1516 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 EEF2KO00418 725 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 AKAP5P24588 427 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 PHKG1Q16816 387 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ARHGAP24Q8N264 748 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 PDZD8Q8NEN9 1154 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 CINPQ9BW66 212 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 VPS11Q9H270 941 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 MRPL17Q9NRX2 175 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 C6orf203Q9P0P8 240 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 WDR91A4D1P6 747 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 F5H5T6 163 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 CYP26A1O43174 497 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 TTC4O95801 387 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 RPLP2P05387 115 aaKnown RBP7.52□□□□□ -1.2
RAG1-201ENST00000299440 SYN1P17600 705 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 CHRNA3P32297 505 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 CNTN2Q02246 1040 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 SNRNP35Q16560 246 aaKnown RBP7.52□□□□□ -1.2
RAG1-201ENST00000299440 RABL6Q3YEC7 729 aaPredicted RBP7.52□□□□□ -1.2
RAG1-201ENST00000299440 ZC2HC1CQ53FD0 456 aaPredicted RBP7.52□□□□□ -1.2
RAG1-201ENST00000299440 ATP6V0D2Q8N8Y2 350 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 HPS3Q969F9 1004 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 C18orf8Q96DM3 657 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 AHCYL2Q96HN2 611 aaKnown RBP7.52□□□□□ -1.2
RAG1-201ENST00000299440 ADAM2Q99965 735 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 REEP2Q9BRK0 252 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 TIPINQ9BVW5 301 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 VPS33BQ9H267 617 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 VCX3BQ9H321 246 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 NHEJ1Q9H9Q4 299 aaPredicted RBP7.52□□□□□ -1.2
RAG1-201ENST00000299440 PXMP2Q9NR77 195 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 PPP2R2CQ9Y2T4 447 aa7.52□□□□□ -1.2
RAG1-201ENST00000299440 ABCA9Q8IUA7 1624 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 NDUFAB1O14561 156 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 CABYRO75952 493 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 LRRC43Q8N309 656 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 ARNTL2Q8WYA1 636 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 NCLNQ969V3 563 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 ZNF558Q96NG5 402 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 TAF1DQ9H5J8 278 aaPredicted RBP7.52□□□□□ -1.21
RAG1-201ENST00000299440 VPS28Q9UK41 221 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 NCKAP1Q9Y2A7 1128 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 TMX2Q9Y320 296 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 SLC12A8A0AV02 714 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 PGRMC1O00264 195 aaKnown RBP7.52□□□□□ -1.21
RAG1-201ENST00000299440 MYO1DO94832 1006 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 RASSF3Q86WH2 238 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 TRAPPC12Q8WVT3 735 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 HAUS8Q9BT25 410 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 HOMER3Q9NSC5 361 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 GTSE1Q9NYZ3 720 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 IP6K2Q9UHH9 426 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 CFAP99D6REC4 459 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 VWA5AO00534 786 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 APOL1O14791 398 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 NDUFB5O43674 189 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 SGCGQ13326 291 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 GPR142Q7Z601 462 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 ZNF564Q8TBZ8 553 aaPredicted RBP7.52□□□□□ -1.21
RAG1-201ENST00000299440 RIT2Q99578 217 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 APBA2Q99767 749 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 TINF2Q9BSI4 451 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 VTA1Q9NP79 307 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 PCDHB9Q9Y5E1 797 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 STK36Q9NRP7 1315 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 TBC1D3BA6NDS4 549 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 SPDYE5A6NIY4 337 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 CASQ2O14958 399 aaPredicted RBP7.52□□□□□ -1.21
RAG1-201ENST00000299440 SLCO1A2P46721 670 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 GPC5P78333 572 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 ROR1Q01973 937 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 PLD1Q13393 1074 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 SPDYE7PQ495Y7 208 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 AK9Q5TCS8 1911 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 PLPP4Q5VZY2 271 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 RHOT2Q8IXI1 618 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 HIPK3Q9H422 1215 aa7.52□□□□□ -1.21
RAG1-201ENST00000299440 IGSF9BQ9UPX0 1349 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 KIAA0391O15091 583 aaKnown RBP7.51□□□□□ -1.21
RAG1-201ENST00000299440 PTPRAP18433 802 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 FNDC3BQ53EP0 1204 aaKnown RBP7.51□□□□□ -1.21
RAG1-201ENST00000299440 SPDL1Q96EA4 605 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 GPRC5CQ9NQ84 441 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 FBXL5Q9UKA1 691 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 ATP8A1Q9Y2Q0 1164 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 MRPS23Q9Y3D9 190 aaKnown RBP7.51□□□□□ -1.21
RAG1-201ENST00000299440 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 KDM1AO60341 852 aa7.51□□□□□ -1.21
RAG1-201ENST00000299440 TSPAN3O60637 253 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms