RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 CYP24A1Q07973 514 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SLC47A2Q86VL8 602 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 NT5C1AQ9BXI3 368 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 THAP2Q9H0W7 228 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 TXNRD2Q9NNW7 524 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ABCB6Q9NP58 842 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 AMACRQ9UHK6 382 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ANAPC5Q9UJX4 755 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 TCHHQ07283 1943 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CNTNAP1P78357 1384 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 ITIH6Q6UXX5 1313 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 ARHGEF37A1IGU5 675 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 KIAA0391O15091 583 aaKnown RBP10.81□□□□□ -0.68
GABRB3-201ENST00000299267 RTN2O75298 545 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 CDH6P55285 790 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 GEN1Q17RS7 908 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 FBXO38Q6PIJ6 1188 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 AFAP1L1Q8TED9 768 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 TNIP3Q96KP6 325 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 B4GALT5O43286 388 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 ACSL3O95573 720 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 ZBED1O96006 694 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 PRKAR2AP13861 404 aaKnown RBP10.81□□□□□ -0.68
GABRB3-201ENST00000299267 GNL1P36915 607 aaPredicted RBP10.81□□□□□ -0.68
GABRB3-201ENST00000299267 AP3M2P53677 418 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 CDC42EP1Q00587 391 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 NOGQ13253 232 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 IQSEC1Q6DN90 963 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 KCTD17Q8N5Z5 321 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 ARHGAP20Q9P2F6 1191 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 NAGPAQ9UK23 515 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 SNED1Q8TER0 1413 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 SSU72P8A0A1W2PR75 194 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
GABRB3-201ENST00000299267 ZC3H11AO75152 810 aaKnown RBP eCLIP10.81□□□□□ -0.68
GABRB3-201ENST00000299267 SRGAP2BP0DMP2 458 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 PSEN2P49810 448 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 CLCN6P51797 869 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 CUL2Q13617 745 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 CLUL1Q15846 466 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 C1orf228Q6PIY5 440 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 RUFY4Q6ZNE9 571 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 BRI3BPQ8WY22 251 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 TEPSINQ96N21 525 aa10.81□□□□□ -0.68
GABRB3-201ENST00000299267 CPSF3Q9UKF6 684 aaKnown RBP10.81□□□□□ -0.68
GABRB3-201ENST00000299267 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 TMEM88BA6NKF7 163 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PHF20L1A8MW92 1017 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 IVLP07476 585 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 MUTP22033 750 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PPP2R5EQ16537 467 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 RNPEPQ9H4A4 650 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 NUP98P52948 1817 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 GARTP22102 1010 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ACAT1P24752 427 aaKnown RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 IFNAR2P48551 515 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PPP3CAQ08209 521 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 RNF10Q8N5U6 811 aaKnown RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PCSK9Q8NBP7 692 aaKnown RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 CYFIP2Q96F07 1278 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ADAM33Q9BZ11 813 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 HMX1Q9NP08 348 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ASNSD1Q9NWL6 643 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 SLC12A6Q9UHW9 1150 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 MRPL42Q9Y6G3 142 aaKnown RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 EPHB6O15197 1021 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 INHBEP58166 350 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 NAB2Q15742 525 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 CC2D1AQ6P1N0 951 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PARD3BQ8TEW8 1205 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 BHMTQ93088 406 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 SEPT5Q99719 369 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 KIF9Q9HAQ2 790 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 STRIP2Q9ULQ0 834 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 TRAF3IP3Q9Y228 551 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 KCNJ1P48048 391 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 KCNJ6P48051 423 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ARHGEF18Q6ZSZ5 1173 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ZNF571Q7Z3V5 609 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ARHGEF19Q8IW93 802 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 CCDC33Q8N5R6 958 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ARRDC4Q8NCT1 418 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 CAPNS2Q96L46 248 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 RNPC3Q96LT9 517 aaKnown RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 SPON2Q9BUD6 331 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 SENP6Q9GZR1 1112 aaPredicted RBP10.8□□□□□ -0.68
GABRB3-201ENST00000299267 OSGEPQ9NPF4 335 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ALG6Q9Y672 507 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 ATRNL1Q5VV63 1379 aa10.8□□□□□ -0.68
GABRB3-201ENST00000299267 IGLV3-22A0A075B6J6 115 aa10.79□□□□□ -0.68
GABRB3-201ENST00000299267 NDUFAB1O14561 156 aa10.79□□□□□ -0.68
GABRB3-201ENST00000299267 NDC80O14777 642 aa10.79□□□□□ -0.68
GABRB3-201ENST00000299267 ZNF862O60290 1169 aa10.79□□□□□ -0.68
GABRB3-201ENST00000299267 FARP2O94887 1054 aaPredicted RBP10.79□□□□□ -0.68
GABRB3-201ENST00000299267 IL18RAPO95256 599 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms