RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GLUD1P00367 558 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 DCNP07585 359 aaKnown RBP22.96■■□□□ 1.27
SMCO4-201ENST00000298966 SP9P0CG40 484 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 IDEP14735 1019 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 RARRES1P49788 294 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 AGMOQ6ZNB7 445 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 AOPEPQ8N6M6 819 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 GPR152Q8TDT2 470 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 PIGOQ8TEQ8 1089 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 SMG7Q92540 1137 aaKnown RBP22.96■■□□□ 1.27
SMCO4-201ENST00000298966 NLRP4Q96MN2 994 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 HERC2P3Q9BVR0 1158 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 ARHGEF3Q9NR81 526 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 WRAP73Q9P2S5 460 aaPredicted RBP22.96■■□□□ 1.27
SMCO4-201ENST00000298966 PPP1R3GB7ZBB8 358 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 TEX28O15482 410 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 ARSHQ5FYA8 562 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 MRPL10Q7Z7H8 261 aaKnown RBP22.95■■□□□ 1.26
SMCO4-201ENST00000298966 C1orf210Q8IVY1 113 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 CEP89Q96ST8 783 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 JPH2Q9BR39 696 aaPredicted RBP22.95■■□□□ 1.26
SMCO4-201ENST00000298966 PIDD1Q9HB75 910 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 AGPAT5Q9NUQ2 364 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 RWDD2AQ9UIY3 292 aa22.95■■□□□ 1.26
SMCO4-201ENST00000298966 BICDL2A1A5D9 508 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 TMEM150BA6NC51 233 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 MAFO75444 373 aaPredicted RBP22.94■■□□□ 1.26
SMCO4-201ENST00000298966 GLUD2P49448 558 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 PAK1Q13153 545 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 FAM26FQ5R3K3 315 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 SARM1Q6SZW1 724 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 PADI6Q6TGC4 694 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 KSR1Q8IVT5 923 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 EXOC8Q8IYI6 725 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 GUF1Q8N442 669 aaKnown RBP22.94■■□□□ 1.26
SMCO4-201ENST00000298966 SH2D3AQ9BRG2 576 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 REEP2Q9BRK0 252 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 OLFML3Q9NRN5 406 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 DLL3Q9NYJ7 618 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 KCNG1Q9UIX4 513 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 PRG3Q9Y2Y8 225 aaPredicted RBP22.94■■□□□ 1.26
SMCO4-201ENST00000298966 FRYLO94915 3013 aa22.94■■□□□ 1.26
SMCO4-201ENST00000298966 MTCL1Q9Y4B5 1905 aaKnown RBP22.94■■□□□ 1.26
SMCO4-201ENST00000298966 RFPL2O75678 378 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 POMCP01189 267 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 MYBP10242 640 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 AFF1P51825 1210 aaKnown RBP22.93■■□□□ 1.26
SMCO4-201ENST00000298966 DCLRE1AQ6PJP8 1040 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 STXBP4Q6ZWJ1 553 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 DCLK2Q8N568 766 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 HDAC7Q8WUI4 952 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.93■■□□□ 1.269e-7■■□□□ 11.5
SMCO4-201ENST00000298966 DLGAP2Q9P1A6 1054 aa22.93■■□□□ 1.26
SMCO4-201ENST00000298966 FAM13AO94988 1023 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 STBD1O95210 358 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 PRCPP42785 496 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 ZNF131P52739 623 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 NCAPHQ15003 741 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 XKR9Q5GH70 373 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 SPATA1Q5VX52 437 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 MCPH1Q8NEM0 835 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 DRC1Q96MC2 740 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 RUSC1Q9BVN2 902 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 PARVGQ9HBI0 331 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 RXFP1Q9HBX9 757 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 MARCH5Q9NX47 278 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 MIA3Q5JRA6 1907 aa22.92■■□□□ 1.26
SMCO4-201ENST00000298966 GPR179Q6PRD1 2367 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 UBE4BO95155 1302 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 DGAT1O75907 488 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 MAPTP10636 758 aaKnown RBP22.91■■□□□ 1.26
SMCO4-201ENST00000298966 LAMP2P13473 410 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 OR1G1P47890 313 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 ALCAMQ13740 583 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 GET4Q7L5D6 327 aaPredicted RBP22.91■■□□□ 1.26
SMCO4-201ENST00000298966 TAS1R1Q7RTX1 841 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 NOC3LQ8WTT2 800 aaKnown RBP22.91■■□□□ 1.26
SMCO4-201ENST00000298966 ZNF707Q96C28 371 aaPredicted RBP22.91■■□□□ 1.26
SMCO4-201ENST00000298966 PLEKHA4Q9H4M7 779 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 C17orf75Q9HAS0 396 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 IFT122Q9HBG6 1241 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 UBN1Q9NPG3 1134 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 SLC2A4RGQ9NR83 387 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 LARSQ9P2J5 1176 aaKnown RBP22.91■■□□□ 1.26
SMCO4-201ENST00000298966 GDAQ9Y2T3 454 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 SPTBN2O15020 2390 aa22.91■■□□□ 1.26
SMCO4-201ENST00000298966 ADCY5O95622 1261 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 SCP2P22307 547 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 ABCD1P33897 745 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 STK4Q13043 487 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 KIAA0319Q5VV43 1072 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 ANO5Q75V66 913 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 SRGAP1Q7Z6B7 1085 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 KIAA0895Q8NCT3 520 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 PJA1Q8NG27 643 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 SHDQ96IW2 340 aa22.9■■□□□ 1.26
SMCO4-201ENST00000298966 ANHXE9PGG2 379 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 SPATA31D3P0C874 917 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 ITGA4P13612 1032 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 CD44P16070 742 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms