RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CAVIN1Q6NZI2 390 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 PSRC1Q6PGN9 363 aaPredicted RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 SPRED2Q7Z698 418 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 MRPL10Q7Z7H8 261 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 NELFCDQ8IXH7 590 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 CEP120Q8N960 986 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 APBB2Q92870 758 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 LPPQ93052 612 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 SMARCE1Q969G3 411 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 HVCN1Q96D96 273 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 DOCK6Q96HP0 2047 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 GSDMAQ96QA5 445 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 NUP62CLQ9H1M0 184 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 CDT1Q9H211 546 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 SEMA6BQ9H3T3 888 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 NXF3Q9H4D5 531 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 RGS18Q9NS28 235 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 EXOC1Q9NV70 894 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 MAPK8IP1Q9UQF2 711 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 TNFSF13BQ9Y275 285 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 HES2Q9Y543 173 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 STYXL1Q9Y6J8 313 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 PRRC2BQ5JSZ5 2229 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 MTCL1Q9Y4B5 1905 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 UBE4BO95155 1302 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 PLXNA3P51805 1871 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 PTPRDP23468 1912 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 A0A0B4J269 797 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 A0A0U1RQF3 1178 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 ABHD14A-ACY1A0A1B0GW23 586 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 SLC35F4A4IF30 521 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 GRXCR1A8MXD5 290 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 BAIAP3O94812 1187 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 ERLIN2O94905 339 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 FGBP02675 491 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 LINC00271P0C7V0 271 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 AXLP30530 894 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 TNFSF9P41273 254 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 MCL1Q07820 350 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 PSMD2Q13200 908 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 NOLC1Q14978 699 aaKnown RBP eCLIP6.45□□□□□ -1.38
SSX3-201ENST00000298396 PCBP1Q15365 356 aaKnown RBP eCLIP6.45□□□□□ -1.38
SSX3-201ENST00000298396 SEZ6Q53EL9 994 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 CCDC183Q5T5S1 534 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 ZNF658Q5TYW1 1059 aaPredicted RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 TWF2Q6IBS0 349 aaKnown RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 NOTUMQ6P988 496 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 SLC27A1Q6PCB7 646 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 MPZL3Q6UWV2 235 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 CRELD2Q6UXH1 353 aaPredicted RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 AGMOQ6ZNB7 445 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 ECHDC2Q86YB7 292 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 RPUSD2Q8IZ73 545 aaKnown RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 ADSSL1Q8N142 457 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 GSTCDQ8NEC7 633 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 FAM84AQ96KN4 292 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 ACCSQ96QU6 501 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 LBHD1Q9BQE6 289 aaPredicted RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 CBWD1Q9BRT8 395 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 FUCA2Q9BTY2 467 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 MRPL4Q9BYD3 311 aaKnown RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 UBE2OQ9C0C9 1292 aaKnown RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
SSX3-201ENST00000298396 CHST12Q9NRB3 414 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 FAM105AQ9NUU6 356 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 MIOSQ9NXC5 875 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 ZDHHC3Q9NYG2 299 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 IPPQ9Y573 584 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 PCDHB2Q9Y5E7 798 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 MYH10P35580 1976 aa6.45□□□□□ -1.38
SSX3-201ENST00000298396 LCHNA4D1U4 455 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 TRIM49BA6NDI0 452 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 H0YCG3 227 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 HNRNPDLO14979 420 aaKnown RBP6.44□□□□□ -1.38
SSX3-201ENST00000298396 N4BP3O15049 544 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 CLIC2O15247 247 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 INPPL1O15357 1258 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 ZNF623O75123 536 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 TOM1L1O75674 476 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 SMC2O95347 1197 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 ADRB2P07550 413 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 FGFR1P11362 822 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 MYOGP15173 224 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 AKAP5P24588 427 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 NOS2P35228 1153 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 RABGGTBP53611 331 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 HTRA4P83105 476 aaPredicted RBP6.44□□□□□ -1.38
SSX3-201ENST00000298396 POU4F2Q12837 409 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 ALCAMQ13740 583 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 IKBKEQ14164 716 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 NAB2Q15742 525 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 KNOP1Q1ED39 458 aaKnown RBP6.44□□□□□ -1.38
SSX3-201ENST00000298396 DPCR1Q3MIW9 517 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 ZNF568Q3ZCX4 644 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 SCARA3Q6AZY7 606 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 ALKAL1Q6UXT8 129 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 ZPBP2Q6X784 338 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 LRRC55Q6ZSA7 311 aa6.44□□□□□ -1.38
SSX3-201ENST00000298396 C11orf57Q6ZUT1 292 aaPredicted RBP6.44□□□□□ -1.38
SSX3-201ENST00000298396 SLC24A5Q71RS6 500 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms