RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 TBX3O15119 743 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 ZWINTO95229 277 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 FGFR1P11362 822 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 ADCY8P40145 1251 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 BTDP43251 543 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 SERPINB4P48594 390 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 BFSP1Q12934 665 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 KPNB1Q14974 876 aaKnown RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 LLGL1Q15334 1064 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 ZC2HC1CQ53FD0 456 aaPredicted RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 ARHGEF19Q8IW93 802 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 UBE2TQ9NPD8 197 aaPredicted RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 LRRC4BQ9NT99 713 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 SENP1Q9P0U3 644 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 UVRAGQ9P2Y5 699 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 UBE4BO95155 1302 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 IGKV6D-41A0A0C4DH26 115 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 PLSCR1O15162 318 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 GSC2O15499 205 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 EXOC3O60645 756 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 GSTT1P30711 240 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 RPA3P35244 121 aaPredicted RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 SLC1A5Q15758 541 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 PLEKHG4Q58EX7 1191 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 TTBK2Q6IQ55 1244 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 BBOF1Q8ND07 529 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 EPS8L1Q8TE68 723 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 GBP5Q96PP8 586 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 NR1H4Q96RI1 486 aaPredicted RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 HERPUD2Q9BSE4 406 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 SYNCQ9H7C4 482 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 METTL5Q9NRN9 209 aaKnown RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 KRT82Q9NSB4 513 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 KANSL3Q9P2N6 904 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 NOCTQ9UK39 431 aaKnown RBP14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 EXOC1LA0A1B0GW35 172 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 SFI1A8K8P3 1242 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 CYP2J2P51589 502 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 ITPK1Q13572 414 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 RINT1Q6NUQ1 792 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 NOP9Q86U38 636 aaKnown RBP14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 KBTBD2Q8IY47 623 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 ARHGAP18Q8N392 663 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 PPFIBP2Q8ND30 876 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 LENG9Q96B70 501 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 SMC6Q96SB8 1091 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 FIZ1Q96SL8 496 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 ZNF184Q99676 751 aaPredicted RBP14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 GLT8D2Q9H1C3 349 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 ZNF212Q9UDV6 495 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 RABGAP1Q9Y3P9 1069 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 USP17L10C9JJH3 530 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 TYROBPO43914 113 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 MAGEA4P43358 317 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 Q4G0T1 1027 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 PRR16Q569H4 304 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 HS2ST1Q7LGA3 356 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 MKL1Q969V6 931 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 CCDC28BQ9BUN5 200 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 MMADHCQ9H3L0 296 aaPredicted RBP14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 NPHS2Q9NP85 383 aa14.33□□□□□ -0.12
RPUSD4-201ENST00000298317 COL24A1Q17RW2 1714 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 MAP3K7O43318 606 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 FAM13AO94988 1023 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 SGPL1O95470 568 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 VPS41P49754 854 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 CYP4A11Q02928 519 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 PKN2Q16513 984 aaKnown RBP14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 IZUMO3Q5VZ72 239 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 KSR1Q8IVT5 923 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 ZCCHC9Q8N567 271 aaKnown RBP14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 ZNF75CPQ92670 426 aaPredicted RBP14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 ZNF653Q96CK0 615 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 CFAP57Q96MR6 1250 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 TUBB6Q9BUF5 446 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 ARL8BQ9NVJ2 186 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 SLC4A7Q9Y6M7 1214 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 ATRNL1Q5VV63 1379 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 CA4P22748 312 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 EIF6P56537 245 aaKnown RBP14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
RPUSD4-201ENST00000298317 CENPCQ03188 943 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms