RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CXCL8P10145 99 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TUBB4BP68371 445 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 CDC42EP1Q00587 391 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 BEX3Q00994 111 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 FMO1Q01740 532 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 CDR2Q01850 454 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 OSBPL9Q96SU4 736 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 KATNAL1Q9BW62 490 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 ISCUQ9H1K1 167 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 SMIM35A0A1B0GVV1 85 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 ZNF185O15231 689 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 MMEP08473 750 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TMEM191BP0C7N4 346 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 ABCB4P21439 1286 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 LACTBP83111 547 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
C9orf3-202ENST00000297979 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
C9orf3-202ENST00000297979 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TPCN2Q8NHX9 752 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 PCDHB18PQ96TA0 734 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 ASS1P00966 412 aaKnown RBP15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TNNC2P02585 160 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 STAG3L1P0CL83 205 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 CYP2C9P11712 490 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 GZMAP12544 262 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 POU5F1Q01860 360 aaKnown RBP15.3■□□□□ 0.04
C9orf3-202ENST00000297979 KYAT1Q16773 422 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 KIZQ2M2Z5 673 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 MEI1Q5TIA1 1274 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 LRRC57Q8N9N7 239 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 CAGE1Q8TC20 777 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 PPP1R13LQ8WUF5 828 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 DDX1Q92499 740 aaKnown RBP15.3■□□□□ 0.04
C9orf3-202ENST00000297979 ANKRD36BP1Q96IX9 119 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 ADAMTS10Q9H324 1103 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 NUB1Q9Y5A7 615 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 RTN2O75298 545 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 FTLP02792 175 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-202ENST00000297979 ACO1P21399 889 aaKnown RBP15.29■□□□□ 0.04
C9orf3-202ENST00000297979 BPIFB4P59827 614 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 NOGQ13253 232 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 TMEM192Q8IY95 271 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 GPR161Q8N6U8 529 aaKnown RBP15.29■□□□□ 0.04
C9orf3-202ENST00000297979 TRPV1Q8NER1 839 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 GCOM2Q9BZD3 368 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-202ENST00000297979 THAP2Q9H0W7 228 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 UMODL1Q5DID0 1318 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 DUSP11O75319 330 aaKnown RBP15.29■□□□□ 0.04
C9orf3-202ENST00000297979 CST3P01034 146 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-202ENST00000297979 CYBAP13498 195 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 ADAM17P78536 824 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 TRPC3Q13507 836 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 COG1Q8WTW3 980 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 TRIB2Q92519 343 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 RPGRIP1Q96KN7 1286 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 ADPGKQ9BRR6 497 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 GABRQQ9UN88 632 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 PCDHB2Q9Y5E7 798 aa15.29■□□□□ 0.04
C9orf3-202ENST00000297979 A0A1B0GUA9 196 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 GPR32O75388 356 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 MYL6P60660 151 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 SGSM1Q2NKQ1 1148 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 RUFY4Q6ZNE9 571 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 CREG2Q8IUH2 290 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 SYCE1Q8N0S2 351 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 SLC35G2Q8TBE7 412 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 ARHGEF26Q96DR7 871 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 PSMB7Q99436 277 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 FLT3LGP49771 235 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
C9orf3-202ENST00000297979 HIC1Q14526 733 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 SCARA3Q6AZY7 606 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 MTERF4Q7Z6M4 381 aaKnown RBP15.28■□□□□ 0.04
C9orf3-202ENST00000297979 ZNF677Q86XU0 584 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 GINS2Q9Y248 185 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 PCDHB4Q9Y5E5 795 aa15.28■□□□□ 0.04
C9orf3-202ENST00000297979 CXCR5P32302 372 aa15.27■□□□□ 0.04
C9orf3-202ENST00000297979 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
C9orf3-202ENST00000297979 RHOT2Q8IXI1 618 aa15.27■□□□□ 0.04
C9orf3-202ENST00000297979 OSGEPQ9NPF4 335 aa15.27■□□□□ 0.04
C9orf3-202ENST00000297979 CNTN6Q9UQ52 1028 aa15.27■□□□□ 0.04
C9orf3-202ENST00000297979 FAM170AA1A519 330 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 LACTBL1A8MY62 500 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-202ENST00000297979 NFICP08651 508 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 C6orf222P0C671 652 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-202ENST00000297979 FGFR4P22455 802 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 TMEM270Q6UE05 265 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 SLFN11Q7Z7L1 901 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 NIF3L1Q9GZT8 377 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 ASB7Q9H672 318 aa15.27■□□□□ 0.03
C9orf3-202ENST00000297979 C17orf102A2RUQ5 167 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 KPNA6O60684 536 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 GPC5P78333 572 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms