RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 CDC42BPGQ6DT37 1551 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 NPHP3-ACAD11A0A0J9YXS1 232 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 AKAP10O43572 662 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 HSPA1AP0DMV8 641 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 HSPA1BP0DMV9 641 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 RARGP13631 454 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 SBK1Q52WX2 424 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 C3orf62Q6ZUJ4 267 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 SLC13A5Q86YT5 568 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ZBTB10Q96DT7 871 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TMEM117Q9H0C3 514 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ZNF408Q9H9D4 720 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 AGO2Q9UKV8 859 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ATP6V1G2O95670 118 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 WEE2P0C1S8 567 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 GEMIN4P57678 1058 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 IMPG1Q17R60 797 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TTC39BQ5VTQ0 682 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 FRMD8Q9BZ67 464 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ADNPQ9H2P0 1102 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 GRID1Q9ULK0 1009 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 CDY2AQ9Y6F7 541 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 CDY1Q9Y6F8 540 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 CAPN6Q9Y6Q1 641 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 PLEKHG2Q9H7P9 1386 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 GLI2P10070 1586 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 EIF3DO15371 548 aaKnown RBP eCLIP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 KCNN4O15554 427 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 CIITAP33076 1130 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 NPEPPSP55786 919 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 DUOXA2Q1HG44 320 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 NLRP9Q7RTR0 991 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 ADCK1Q86TW2 530 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 CATSPER3Q86XQ3 398 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 ZNF555Q8NEP9 628 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 SLC30A5Q8TAD4 765 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 AGR3Q8TD06 166 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 MAP3K14Q99558 947 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 TOPORSQ9NS56 1045 aaPredicted RBP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 NAGPAQ9UK23 515 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 SPOUT1Q5T280 376 aaKnown RBP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 CDKAL1Q5VV42 579 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 ANGPTL8Q6UXH0 198 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 PCYOX1LQ8NBM8 494 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 ULK4Q96C45 1275 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 MRPL4Q9BYD3 311 aaKnown RBP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 C10orf88Q9H8K7 445 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 RAB6BQ9NRW1 208 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 KCND1Q9NSA2 647 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 KRT16P08779 473 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 PHKA2P46019 1235 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 KCNJ1P48048 391 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■□□ 15.7
PBRM1-201ENST00000296302 HERVK_113P62684 666 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 GRIN1Q05586 938 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 UGP2Q16851 508 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 TRIM65Q6PJ69 517 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 C18orf8Q96DM3 657 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 PCMTD2Q9NV79 361 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 PAK5Q9P286 719 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 APRTP07741 180 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 PLEKP08567 350 aaPredicted RBP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 COPAP53621 1224 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 DDIASQ8IXT1 998 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 ZSWIM1Q9BR11 485 aa11.59□□□□□ -0.55
PBRM1-201ENST00000296302 POLR3FQ9H1D9 316 aaPredicted RBP11.59□□□□□ -0.55
PBRM1-201ENST00000296302 MADDQ8WXG6 1647 aa11.58□□□□□ -0.55
PBRM1-201ENST00000296302 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
PBRM1-201ENST00000296302 CDH2P19022 906 aaPredicted RBP11.58□□□□□ -0.56
PBRM1-201ENST00000296302 KCNQ4P56696 695 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 PID1Q7Z2X4 250 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 GID8Q9NWU2 228 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 CHMP2BQ9UQN3 213 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 DTNAQ9Y4J8 743 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 CROCC2H7BZ55 1655 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 F5H6K3 240 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 AIM2O14862 343 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 CCDC159P0C7I6 412 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 KLRC3Q07444 240 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 DSTYKQ6XUX3 929 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 PACS2Q86VP3 889 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 ZNF677Q86XU0 584 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 SYNE4Q8N205 404 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 UNC45AQ9H3U1 944 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 PCDHB2Q9Y5E7 798 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 A0A087X0T9 212 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 SRP72O76094 671 aaKnown RBP11.58□□□□□ -0.56
PBRM1-201ENST00000296302 FAM228BP0C875 321 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 SNRPFP62306 86 aaKnown RBP11.58□□□□□ -0.56
PBRM1-201ENST00000296302 STXBP2Q15833 593 aa11.58□□□□□ -0.56
PBRM1-201ENST00000296302 PPIL6Q8IXY8 311 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms