RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 PCDHB18PQ96TA0 734 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 PRMT1Q99873 361 aaKnown RBP6.58□□□□□ -1.36
VCAM1-201ENST00000294728 TMEM117Q9H0C3 514 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 LRMDAQ9H2I8 198 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 RABEP2Q9H5N1 569 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF408Q9H9D4 720 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 ARHGEF10LQ9HCE6 1279 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 KIAA1586Q9HCI6 787 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 GOPCQ9HD26 462 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 UBE2TQ9NPD8 197 aaPredicted RBP6.58□□□□□ -1.36
VCAM1-201ENST00000294728 TBC1D22BQ9NU19 505 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 EFR3BQ9Y2G0 817 aa6.58□□□□□ -1.36
VCAM1-201ENST00000294728 ARHGEF35A5YM69 484 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 H0YCG3 227 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 MPHOSPH10O00566 681 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 HIP1RO75146 1068 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 LUC7L3O95232 432 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 CYP1A1P04798 512 aaPredicted RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 CYP11B1P15538 503 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 GARTP22102 1010 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 MXI1P50539 228 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ZC2HC1CQ53FD0 456 aaPredicted RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 MAP4K3Q8IVH8 894 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ARHGEF19Q8IW93 802 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 AGGF1Q8N302 714 aaeCLIP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ZCCHC9Q8N567 271 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ENDOVQ8N8Q3 282 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ARHGEF2Q92974 986 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 NUP85Q9BW27 656 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 DCLK3Q9C098 648 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 UNC45AQ9H3U1 944 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 LRRC4CQ9HCJ2 640 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 TXLNGQ9NUQ3 528 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 FEM1BQ9UK73 627 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 SMG5Q9UPR3 1016 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 DRG1Q9Y295 367 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ZHX2Q9Y6X8 837 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 POLR2AP24928 1970 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 DHX15O43143 795 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 TRPA1O75762 1119 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 RAD17O75943 681 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 UNC5CO95185 931 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ABCB4P21439 1286 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 SFNP31947 248 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 MCL1Q07820 350 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 NFIAQ12857 509 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 PRPF4BQ13523 1007 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 SKIDA1Q1XH10 827 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 FAM91A1Q658Y4 838 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 HIBCHQ6NVY1 386 aaPredicted RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 PADI6Q6TGC4 694 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 CLEC10AQ8IUN9 316 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 TPH2Q8IWU9 490 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 CCDC105Q8IYK2 499 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 EXD1Q8NHP7 514 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 EPS8L3Q8TE67 593 aaKnown RBP6.57□□□□□ -1.36
VCAM1-201ENST00000294728 DENND1AQ8TEH3 1009 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 SLC20A1Q8WUM9 679 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 MAML1Q92585 1016 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 LXNQ9BS40 222 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF577Q9BSK1 485 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 SLC24A2Q9UI40 661 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 UBIAD1Q9Y5Z9 338 aa6.57□□□□□ -1.36
VCAM1-201ENST00000294728 TMEM120BA0PK00 339 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 DDTLA6NHG4 134 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 KLRC2P26717 231 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ADSSP30520 456 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 RARRES1P49788 294 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 COG2Q14746 738 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PPP1R7Q15435 360 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ENOX2Q16206 610 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PARD3BQ8TEW8 1205 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ELAC2Q9BQ52 826 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 SELENOSQ9BQE4 189 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 TUBB6Q9BUF5 446 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 SAR1AQ9NR31 198 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 TMOD4Q9NZQ9 345 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 LNPEPQ9UIQ6 1025 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 LRRC42Q9Y546 428 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 STYXL1Q9Y6J8 313 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ADM5C9JUS6 153 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 IPO5O00410 1097 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 TRIM49P0CI25 452 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 TRIM49CP0CI26 452 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 FDX1P10109 184 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 TM4SF4P48230 202 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PSEN1P49768 467 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 JAK3P52333 1124 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF280AP59817 542 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 IL9RQ01113 521 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CYP4A11Q02928 519 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 KRT17Q04695 432 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 RNASELQ05823 741 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CDK18Q07002 472 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms