RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HBP1O60381 514 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 LCP1P13796 627 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 LMBRD2Q68DH5 695 aaPredicted RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 FRMD8P1Q9BZ68 369 aaPredicted RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 NSMCE4AQ9NXX6 385 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 ZFATQ9P243 1243 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 PAK5Q9P286 719 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 PSMC3IPQ9P2W1 217 aaPredicted RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 CYP11B2P19099 503 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 FGFR2P21802 821 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 EEF1B2P24534 225 aaKnown RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 PEX19P40855 299 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 CCNYL1Q8N7R7 359 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 CPA5Q8WXQ8 436 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 RBM15Q96T37 977 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 KRT82Q9NSB4 513 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 PLAGL2Q9UPG8 496 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 KCNN4O15554 427 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 RAD51Q06609 339 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 ZC3H18Q86VM9 953 aaKnown RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 THOC1Q96FV9 657 aaKnown RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 EHD4Q9H223 541 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 PSD3Q9NYI0 1048 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
PTCD1-201ENST00000292478 E5RI56 91 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 GTF2H1P32780 548 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 ANO4Q32M45 955 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 JAMLQ86YT9 394 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 ULK4Q96C45 1275 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 NIF3L1Q9GZT8 377 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 KCNH7Q9NS40 1196 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
PTCD1-201ENST00000292478 DCCP43146 1447 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
PTCD1-201ENST00000292478 DIAPH2O60879 1101 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 ICAM1P05362 532 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 PRLRP16471 622 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 N4BP2L2Q92802 583 aaPredicted RBP13.46□□□□□ -0.25
PTCD1-201ENST00000292478 ELP3Q9H9T3 547 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 ZCCHC17Q9NP64 241 aaKnown RBP13.46□□□□□ -0.25
PTCD1-201ENST00000292478 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.25
PTCD1-201ENST00000292478 MCF2P10911 925 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 GRB10Q13322 594 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 VEPH1Q14D04 833 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 IMPG1Q17R60 797 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 ATF7IP2Q5U623 682 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 SLC30A5Q8TAD4 765 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 TRIM54Q9BYV2 358 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 NEU2Q9Y3R4 380 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 SALL3Q9BXA9 1300 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 ZNF235Q14590 738 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 ZC2HC1CQ53FD0 456 aaPredicted RBP13.46□□□□□ -0.25
PTCD1-201ENST00000292478 PIP4K2CQ8TBX8 421 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
PTCD1-201ENST00000292478 OSBPL8Q9BZF1 889 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 SLC13A1Q9BZW2 595 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 TMEM117Q9H0C3 514 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 CARD9Q9H257 536 aa13.46□□□□□ -0.25
PTCD1-201ENST00000292478 EIF3HO15372 352 aaKnown RBP eCLIP13.46□□□□□ -0.26
PTCD1-201ENST00000292478 KITP10721 976 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 POU5F1BQ06416 359 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 SV2CQ496J9 727 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.46□□□□□ -0.26
PTCD1-201ENST00000292478 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.26
PTCD1-201ENST00000292478 KAZALD1Q96I82 304 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 PARK7Q99497 189 aaKnown RBP13.46□□□□□ -0.26
PTCD1-201ENST00000292478 ERP44Q9BS26 406 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 GTF3C4Q9UKN8 822 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 NWD1Q149M9 1564 aa13.46□□□□□ -0.26
PTCD1-201ENST00000292478 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MEFVO15553 781 aaPredicted RBP13.45□□□□□ -0.26
PTCD1-201ENST00000292478 COMTP21964 271 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 NPEPPSP55786 919 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 TBCCQ15814 346 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 ANO5Q75V66 913 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 TSPAN17Q96FV3 270 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 SNX9Q9Y5X1 595 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 ALG6Q9Y672 507 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MSH4O15457 936 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 LRRC14Q15048 493 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 HP1BP3Q5SSJ5 553 aaPredicted RBP13.45□□□□□ -0.26
PTCD1-201ENST00000292478 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 CATSPER1Q8NEC5 780 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 SNX19Q92543 992 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MCEEQ96PE7 176 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 TRIM51Q9BSJ1 452 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 ERAP1Q9NZ08 941 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms