RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PDE1BQ01064 536 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 MOXD1Q6UVY6 613 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 RASSF3Q86WH2 238 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 PIN4Q9Y237 131 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 PCDHAC2Q9Y5I4 1007 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 GPC4O75487 556 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 GRAMD1AQ96CP6 724 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 KCND2Q9NZV8 630 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 LIMA1Q9UHB6 759 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 POTECB2RU33 542 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 GIPC1O14908 333 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 TRAPPC3O43617 180 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 ZRANB2O95218 330 aaKnown RBP eCLIP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 POLR2BP30876 1174 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 SCTRP47872 440 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF211Q13398 564 aaPredicted RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 LRIG3Q6UXM1 1119 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 AGGF1Q8N302 714 aaeCLIP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 ANKS1AQ92625 1134 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 TRAF3IP3Q9Y228 551 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 DGKZQ13574 1117 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ACVR2BQ13705 512 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ILDR2Q71H61 639 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ANO5Q75V66 913 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 GPR142Q7Z601 462 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 CCDC68Q9H2F9 335 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ZFATQ9P243 1243 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 KIAA0391O15091 583 aaKnown RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 TTC4O95801 387 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 NSFP46459 744 aaKnown RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ARFIP2P53365 341 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 RNF149Q8NC42 400 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SLITRK6Q9H5Y7 841 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 GCNT4Q9P109 453 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 TUBE1Q9UJT0 475 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 NOC2LQ9Y3T9 749 aaKnown RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 A0A1W2PQC6 194 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 HOXA2O43364 376 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 CSPG5O95196 566 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 PRKCEQ02156 737 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 BBS9Q3SYG4 887 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 RABGAP1LQ5R372 815 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 KDM7AQ6ZMT4 941 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SEPT8Q92599 483 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 RAG1P15918 1043 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 TSPY1Q01534 308 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 LRRC63Q05C16 580 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 ACBD5Q5T8D3 534 aaPredicted RBP12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 PPP1R2P3Q6NXS1 205 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 PCIF1Q9H4Z3 704 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 SLC38A10Q9HBR0 1119 aa12.03□□□□□ -0.48
NPC1L1-201ENST00000289547 UBTFL6P0CB48 400 aaPredicted RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 MYBL1P10243 752 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 HSPA9P38646 679 aaKnown RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 SLC12A2P55011 1212 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 TMPRSS15P98073 1019 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 NOL9Q5SY16 702 aaKnown RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 METTL7BQ6UX53 244 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 MIEF2Q96C03 454 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 SERPINI1Q99574 410 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 TINF2Q9BSI4 451 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 ANKZF1Q9H8Y5 726 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 SAYSD1Q9NPB0 183 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 BTBD19C9JJ37 291 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 E9PMD0 336 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 GPR182O15218 404 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 OATP04181 439 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 MED21Q13503 144 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 RANBP17Q9H2T7 1088 aaKnown RBP12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 ANKEF1Q9NU02 776 aa12.02□□□□□ -0.48
NPC1L1-201ENST00000289547 HMGCRP04035 888 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 ATICP31939 592 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PGM1P36871 562 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 THPOP40225 353 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 ACTR2P61160 394 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 ATP2C1P98194 919 aaPredicted RBP12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 IFRD2Q12894 506 aaPredicted RBP12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 SEC23AQ15436 765 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 AGBL2Q5U5Z8 902 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 TLK2Q86UE8 772 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms