RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.813e-16■□□□□ 10.2
HMGN1-201ENST00000288344 PTPN14Q15678 1187 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 BMT2Q1RMZ1 405 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 ZNF568Q3ZCX4 644 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 HERC4Q5GLZ8 1057 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 L1TD1Q5T7N2 865 aaKnown RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 SCARA3Q6AZY7 606 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 LILRA6Q6PI73 481 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 UNC13DQ70J99 1090 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 ZBTB33Q86T24 672 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 FMR1NBQ8N0W7 255 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 VPS52Q8N1B4 723 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 CXorf38Q8TB03 319 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 SPATA20Q8TB22 786 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 URGCPQ8TCY9 931 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 SCFD1Q8WVM8 642 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 TCF25Q9BQ70 676 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 APOL6Q9BWW8 343 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 TRIM6Q9C030 488 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 PARP2Q9UGN5 583 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 PUF60Q9UHX1 559 aaKnown RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 GDAQ9Y2T3 454 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 ATP6V1DQ9Y5K8 247 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 K7ENM7 598 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 PER2O15055 1255 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 CLASP2O75122 1294 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 CXCL14O95715 111 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 LRPAP1P30533 357 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 KCNQ1P51787 676 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 MRPS5P82675 430 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 AMPD3Q01432 767 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 DSG1Q02413 1049 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 RNASELQ05823 741 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 MRPL58Q14197 206 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 SPOUT1Q5T280 376 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 SYCE2Q6PIF2 218 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 DCLRE1AQ6PJP8 1040 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 CLEC17AQ6ZS10 378 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 GRAMD1CQ8IYS0 662 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 HACE1Q8IYU2 909 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 RASSF8Q8NHQ8 419 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 FEZF2Q8TBJ5 459 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 RABGGTAQ92696 567 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 C18orf25Q96B23 403 aaPredicted RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 KCTD12Q96CX2 325 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 BORCS6Q96GS4 357 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 POM121Q96HA1 1249 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 FBXL18Q96ME1 805 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 CDCA3Q99618 268 aaPredicted RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 BLZF1Q9H2G9 400 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 MRPL44Q9H9J2 332 aaKnown RBP10□□□□□ -0.81
HMGN1-201ENST00000288344 FAM13BQ9NYF5 915 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 TBC1D7Q9P0N9 293 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 THEGQ9P2T0 379 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 ADAM28Q9UKQ2 775 aa10□□□□□ -0.81
HMGN1-201ENST00000288344 MTCL1Q9Y4B5 1905 aaKnown RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 LACTBL1A8MY62 500 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 EIF3DO15371 548 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 TBCAO75347 108 aaKnown RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 PRPF6O94906 941 aaKnown RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 ZNF202O95125 648 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 KIF4AO95239 1232 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 CNPP09543 421 aaKnown RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 CYP3A5P20815 502 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 FGFR3P22607 806 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 GCGRP47871 477 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 OR1G1P47890 313 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 NRIP1P48552 1158 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 AARSP49588 968 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 CLCNKBP51801 687 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 OSTNP61366 133 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 DPYDQ12882 1025 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 STK4Q13043 487 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 ALCAMQ13740 583 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 QPCTQ16769 361 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 GLRA4Q5JXX5 417 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 SLFN12LQ6IEE8 588 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 KRBA2Q6ZNG9 492 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 CCDC65Q8IXS2 484 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 KIAA0895Q8NCT3 520 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 LNX1Q8TBB1 728 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 AUTS2Q8WXX7 1259 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 SUSD6Q92537 303 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 TMEM169Q96HH4 297 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 KLHL5Q96PQ7 755 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 RPS6KC1Q96S38 1066 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 HERC2P3Q9BVR0 1158 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 CCDC94Q9BW85 323 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 COLEC11Q9BWP8 271 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms