RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SLC17A8Q8NDX2 589 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 PARD3BQ8TEW8 1205 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 SLC7A3Q8WY07 619 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 PGM2Q96G03 612 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 ERP44Q9BS26 406 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 TRIM51Q9BSJ1 452 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 ZDHHC18Q9NUE0 388 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 ZNFX1Q9P2E3 1918 aaKnown RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 WNT7BP56706 349 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 DHX34Q14147 1143 aaKnown RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 CCDC197Q8NCU1 140 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 SEPT1Q8WYJ6 367 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 GLG1Q92896 1179 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 HAPLN2Q9GZV7 340 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 PABPC3Q9H361 631 aaKnown RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 ACP6Q9NPH0 428 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 PPARDQ03181 441 aa19.58■□□□□ 0.73
PDLIM3-201ENST00000284767 ANKS4BQ8N8V4 417 aa19.58■□□□□ 0.73
PDLIM3-201ENST00000284767 SLC35G2Q8TBE7 412 aa19.58■□□□□ 0.73
PDLIM3-201ENST00000284767 ZNF668Q96K58 619 aaPredicted RBP19.58■□□□□ 0.73
PDLIM3-201ENST00000284767 DAAM1Q9Y4D1 1078 aa19.58■□□□□ 0.73
PDLIM3-201ENST00000284767 PDHXO00330 501 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 CAND2O75155 1236 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 TGFB3P10600 412 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 DRG2P55039 364 aaKnown RBP19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 RTP1P59025 263 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 CROCCP2Q86T23 111 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 PNMA8AQ86V59 439 aaPredicted RBP19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 FMNL3Q8IVF7 1028 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 TRAPPC12Q8WVT3 735 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 ZNF317Q96PQ6 595 aaPredicted RBP19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 GPR20Q99678 358 aa19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 NIFKQ9BYG3 293 aaKnown RBP19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 TPX2Q9ULW0 747 aaKnown RBP19.58■□□□□ 0.72
PDLIM3-201ENST00000284767 TTLL13PA6NNM8 815 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 ASAP2O43150 1006 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 SLC8A1P32418 973 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 ARL2P36404 184 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 MMP13P45452 471 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 PMS2P54278 862 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 TARBP2Q15633 366 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 DCAF12L1Q5VU92 463 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 SLC20A1Q8WUM9 679 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 CTNNBL1Q8WYA6 563 aaPredicted RBP19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 MS4A4AQ96JQ5 239 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 EPB41L4BQ9H329 900 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 OSGEPQ9NPF4 335 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 SCN4AP35499 1836 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 CCT8L1PA6NM43 557 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 BTBD19C9JJ37 291 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 MGRN1O60291 552 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 GSTA1P08263 222 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 ACOT2P49753 483 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 LIG4P49917 911 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 ITIH4Q14624 930 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 SEZ6Q53EL9 994 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 ZBTB41Q5SVQ8 909 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 CELF3Q5SZQ8 465 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 FAM228AQ86W67 206 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 LRRC71Q8N4P6 559 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 MDM1Q8TC05 714 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 TAS1R2Q8TE23 839 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 SPATA33Q96N06 139 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 TRIM31Q9BZY9 425 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 LRRC4CQ9HCJ2 640 aa19.57■□□□□ 0.72
PDLIM3-201ENST00000284767 NOP56O00567 594 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 SNRPFP62306 86 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 CYP24A1Q07973 514 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 BRDTQ58F21 947 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 DENND2CQ68D51 928 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 FBXL18Q96ME1 805 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 TARS2Q9BW92 718 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 SEPT11Q9NVA2 429 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 TAS2R14Q9NYV8 317 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 RASAL2Q9UJF2 1139 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 NR2E1Q9Y466 385 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 CCL15-CCL14A0A0B4J2E2 113 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 TXNP10599 105 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 EZRP15311 586 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 GBP1P32455 592 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 ELF1P32519 619 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 CAPSQ13938 189 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 CCL15Q16663 113 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 GPD1LQ8N335 351 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 PPM1KQ8N3J5 372 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 DEPTORQ8TB45 409 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 BRI3BPQ8WY22 251 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 PI4K2AQ9BTU6 479 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 MROH8Q9H579 483 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 AZI2Q9H6S1 392 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 ANKFY1Q9P2R3 1169 aa19.56■□□□□ 0.72
PDLIM3-201ENST00000284767 MAPK13O15264 365 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 KIF1CO43896 1103 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 GJB1P08034 283 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 MMEP08473 750 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 CHN1P15882 459 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 NLRP11P59045 1033 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 CETN1Q12798 172 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 FAM160B1Q5W0V3 765 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms