RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 UBXN11Q5T124 520 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 ZNF410Q86VK4 478 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 LPPQ93052 612 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 SYT11Q9BT88 431 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 RPF1Q9H9Y2 349 aaKnown RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 MMEP08473 750 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 GHRP10912 638 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 CYLC1P35663 651 aaPredicted RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 CXorf38Q8TB03 319 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 ZFP42Q96MM3 310 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 KIAA1586Q9HCI6 787 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 HMGXB4Q9UGU5 601 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 HCRTO43612 131 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 LDHAP00338 332 aaKnown RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 ITGB3P05106 788 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 ABCB4P21439 1286 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 HOXD10P28358 340 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 MAGEA1P43355 309 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 SRGAP1Q7Z6B7 1085 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 SERINC5Q86VE9 423 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 SHC3Q92529 594 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 PSMB7Q99436 277 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 CELF4Q9BZC1 486 aaKnown RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 XYLT2Q9H1B5 865 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 NAGPAQ9UK23 515 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 NCK2O43639 380 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 MGEA5O60502 916 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 DNA2P51530 1060 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 MRPS6P82932 125 aaKnown RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 POU5F1BQ06416 359 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 SLC18A3Q16572 532 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 EPS8L1Q8TE68 723 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 SYN2Q92777 582 aaPredicted RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 DEFB118Q96PH6 123 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 SDCBP2Q9H190 292 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 B4GALT4O60513 344 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 RECQL4O94761 1208 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 MCF2P10911 925 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 ACO1P21399 889 aaKnown RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 CD52P31358 61 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 VAV2P52735 878 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 CETN1Q12798 172 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 SPA17Q15506 151 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 PASD1Q8IV76 773 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 FAM71AQ8IYT1 594 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 RPUSD2Q8IZ73 545 aaKnown RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 ZSWIM1Q9BR11 485 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 NOCTQ9UK39 431 aaKnown RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 PACSIN2Q9UNF0 486 aaPredicted RBP12.6□□□□□ -0.39
SSRP1-201ENST00000278412 ST3GAL5Q9UNP4 418 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 HYOU1Q9Y4L1 999 aa12.6□□□□□ -0.39
SSRP1-201ENST00000278412 A0A1W2PQ45 241 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 A0A1W2PQY0 241 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 P4HA2O15460 535 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 LCA5LO95447 670 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 PRKCIP41743 596 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 SOX4Q06945 474 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 TMEM270Q6UE05 265 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 SESTD1Q86VW0 696 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 WDR49Q8IV35 697 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 REM2Q8IYK8 340 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 SMG8Q8ND04 991 aaKnown RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 PRIMPOLQ96LW4 560 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 LPIN3Q9BQK8 851 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 C1orf112Q9NSG2 853 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 SSU72P8A0A1W2PR75 194 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 CLTAP09496 248 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 POLR2BP30876 1174 aaKnown RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 GTF2H1P32780 548 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 ZNF618Q5T7W0 954 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 ALKBH5Q6P6C2 394 aaKnown RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 ARHGEF26Q96DR7 871 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 ACAP3Q96P50 834 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-201ENST00000278412 SMYD3Q9H7B4 428 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 FRMPD3Q5JV73 1810 aa12.59□□□□□ -0.39
SSRP1-201ENST00000278412 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms