RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CTIFO43310 598 aaKnown RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 SUPT20HL2P0C7V6 817 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 CLCN3P51790 818 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 GJB7Q6PEY0 223 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 CBWD2Q8IUF1 395 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 ALKBH8Q96BT7 664 aaKnown RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 IDI2Q9BXS1 227 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 KIAA1683Q9H0B3 1180 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 PLEKHA5Q9HAU0 1116 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 ALG6Q9Y672 507 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 ZNF235Q14590 738 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 NCAPHQ15003 741 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 HIBCHQ6NVY1 386 aaPredicted RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 TARSL2A2RTX5 802 aaKnown RBP11.9□□□□□ -0.51
USP6NL-201ENST00000277575 MX2P20592 715 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 GTF2H1P32780 548 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 NPTX2P47972 431 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 RAD51Q06609 339 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 ART3Q13508 389 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 GIT2Q14161 759 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 HIF1AQ16665 826 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 SEZ6Q53EL9 994 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 PLEKHH3Q7Z736 793 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 ANKS1AQ92625 1134 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 Q9H521 79 aa11.9□□□□□ -0.51
USP6NL-201ENST00000277575 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 NPTXRO95502 500 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 COMTP21964 271 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SULT1E1P49888 294 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SMAD1Q15797 465 aaKnown RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 NOP9Q86U38 636 aaKnown RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SYN2Q92777 582 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ASIC4Q96FT7 647 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 OSBPL8Q9BZF1 889 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 PPP2R3BQ9Y5P8 575 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 AK9Q5TCS8 1911 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 KPNA7A9QM74 516 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 NVLO15381 856 aaKnown RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 CFLARO15519 480 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SESN2P58004 480 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 POU5F1BQ06416 359 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SNCBQ16143 134 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SV2CQ496J9 727 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 CBWD1Q9BRT8 395 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 DFFAO00273 331 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 KCNN4O15554 427 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ATP9BO43861 1147 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 APRTP07741 180 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 RGS2P41220 211 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 CASP4P49662 377 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 DRP2Q13474 957 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 FAM117BQ6P1L5 589 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 TRIM65Q6PJ69 517 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 CCNYL1Q8N7R7 359 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 FGD4Q96M96 766 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ARHGAP23Q9P227 1491 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ITGB3P05106 788 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 TYK2P29597 1187 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 PPP2R2AP63151 447 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ZNF677Q86XU0 584 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
USP6NL-201ENST00000277575 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
USP6NL-201ENST00000277575 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 ATMINO43313 823 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 NAMPTP43490 491 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 COPS2P61201 443 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 YWHAHQ04917 246 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 Q4G0T1 1027 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 GBP7Q8N8V2 638 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 RMDN1Q96DB5 314 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 EFHD1Q9BUP0 239 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 SARS2Q9NP81 518 aaKnown RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 FOXN3O00409 490 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 FCGRTP55899 365 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 ZNF484Q5JVG2 852 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 RNF180Q86T96 592 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 CYP2W1Q8TAV3 490 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 UBA3Q8TBC4 463 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 AGAP3Q96P47 875 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 GOLPH3Q9H4A6 298 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms