RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 FBXO25Q8TCJ0 367 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CBWD1Q9BRT8 395 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 TRIM31Q9BZY9 425 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 AGO4Q9HCK5 861 aaKnown RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 HMGCRP04035 888 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CHRNB2P17787 502 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 TMOD1P28289 359 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 ADORA2AP29274 412 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 GPC3P51654 580 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 RNF187Q5TA31 235 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 KRT39Q6A163 491 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CCDC137Q6PK04 289 aaKnown RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 SLC13A5Q86YT5 568 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 KIFAP3Q92845 792 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CHMP6Q96FZ7 201 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 SEC16BQ96JE7 1060 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 XPO6Q96QU8 1125 aaKnown RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 ROPN1BQ9BZX4 212 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CCDC134Q9H6E4 229 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 ROPN1Q9HAT0 212 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 ANKEF1Q9NU02 776 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 SNX24Q9Y343 169 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CAND2O75155 1236 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 YWHABP31946 246 aaKnown RBP13.81□□□□□ -0.2
C9orf3-201ENST00000277198 SFNP31947 248 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 RGS2P41220 211 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 JAK3P52333 1124 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 RWDD2BP57060 319 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 LACTB2Q53H82 288 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-201ENST00000277198 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 KRT35Q92764 455 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 ART4Q93070 314 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 C18orf8Q96DM3 657 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 DEFB118Q96PH6 123 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 PCDHB18PQ96TA0 734 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 APBA2Q99767 749 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 LRRC19Q9H756 370 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 C17orf75Q9HAS0 396 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 RAVER2Q9HCJ3 691 aaKnown RBP13.81□□□□□ -0.2
C9orf3-201ENST00000277198 TMEM8AQ9HCN3 771 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 CCPG1Q9ULG6 757 aa13.81□□□□□ -0.2
C9orf3-201ENST00000277198 DNAH12Q6ZR08 3092 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 PGK2P07205 417 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 GHRP10912 638 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 MAN1A1P33908 653 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CDR2Q01850 454 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 MESDQ14696 234 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 TNFAIP8L3Q5GJ75 292 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 SYDE1Q6ZW31 735 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 TRMT10CQ7L0Y3 403 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CPLX4Q7Z7G2 160 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 RDM1Q8NG50 284 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 KDM4CQ9H3R0 1056 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 IVNS1ABPQ9Y6Y0 642 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 RGS16O15492 202 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 ASAP2O43150 1006 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 SGPL1O95470 568 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 GJB1P08034 283 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CYP11B1P15538 503 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 DRD4P21917 467 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CCND3P30281 292 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 ABCD1P33897 745 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 PDE6CP51160 858 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 GTF2A1P52655 376 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 PSMC5P62195 406 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 FMO1Q01740 532 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 MTMR1Q13613 665 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 SLC29A2Q14542 456 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 SNRNP48Q6IEG0 339 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 ADAT2Q7Z6V5 191 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 RIOX2Q8IUF8 465 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 MAP4K3Q8IVH8 894 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CCDC13Q8IYE1 715 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 FBXL18Q96ME1 805 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 KREMEN1Q96MU8 473 aa13.8□□□□□ -0.2
C9orf3-201ENST00000277198 A1CFQ9NQ94 594 aaKnown RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 PAK6Q9NQU5 681 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-201ENST00000277198 DDX39AO00148 427 aaKnown RBP13.79□□□□□ -0.2
C9orf3-201ENST00000277198 SPOPO43791 374 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 PYGMP11217 842 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms