RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
MRPS28-201ENST00000276585 DMXL2Q8TDJ6 3036 aa13.57□□□□□ -0.24
MRPS28-201ENST00000276585 CITO14578 2027 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 INO80B-WBP1J3KQ70 363 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 LAD1O00515 517 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 ZNF806P0C7X5 589 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 SKIP12755 728 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 CDC25AP30304 524 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 CXCL12P48061 93 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 SATB1Q01826 763 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 TFDP1Q14186 410 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 PCBP1Q15365 356 aaKnown RBP eCLIP13.56□□□□□ -0.24
MRPS28-201ENST00000276585 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 RNF43Q68DV7 783 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 HEATR6Q6AI08 1181 aaKnown RBP13.56□□□□□ -0.24
MRPS28-201ENST00000276585 ZNF280BQ86YH2 543 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 CCDC51Q96ER9 411 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-201ENST00000276585 HERC2P3Q9BVR0 1158 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
MRPS28-201ENST00000276585 FAN1Q9Y2M0 1017 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 IPPQ9Y573 584 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 AKAP13Q12802 2813 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 LOC400499M0QZD8 3231 aa13.56□□□□□ -0.24
MRPS28-201ENST00000276585 SDK1Q7Z5N4 2213 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 ARHGEF35A5YM69 484 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 ERLIN2O94905 339 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 ALDH2P05091 517 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 AXLP30530 894 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 GLUD2P49448 558 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 NTHL1P78549 312 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 MAPK7Q13164 816 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 C19orf48Q6RUI8 117 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 LONP2Q86WA8 852 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-201ENST00000276585 GLYCTKQ8IVS8 523 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 DAW1Q8N136 415 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 URGCPQ8TCY9 931 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 LRRC15Q8TF66 581 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 FGF13Q92913 245 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 PNMA5Q96PV4 448 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 BHMT2Q9H2M3 363 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 FZD8Q9H461 694 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
MRPS28-201ENST00000276585 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 KIAA1024Q9UPX6 916 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 WASF3Q9UPY6 502 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 HES2Q9Y543 173 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-201ENST00000276585 CNTNAP2Q9UHC6 1331 aa13.55□□□□□ -0.24
MRPS28-201ENST00000276585 VWA8A3KMH1 1905 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 LRRIQ4A6NIV6 560 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 E9PMD0 336 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 H3BQV1 296 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 MAN2B1O00754 1011 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 TGM5O43548 720 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 DDHD2O94830 711 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 FAM187BQ17R55 369 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 HYIQ5T013 277 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
MRPS28-201ENST00000276585 NOTUMQ6P988 496 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 TAS1R1Q7RTX1 841 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 PDZD3Q86UT5 571 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 PGBD4Q96DM1 585 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 KIFC3Q9BVG8 833 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 RUSC1Q9BVN2 902 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 USP20Q9Y2K6 914 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
MRPS28-201ENST00000276585 BPTFQ12830 3046 aa13.54□□□□□ -0.24
MRPS28-201ENST00000276585 IGSF10Q6WRI0 2623 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 GREB1Q4ZG55 1949 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 A0A1B0GUA9 196 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 NRP1O14786 923 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 ZMYND10O75800 440 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 PAPLNO95428 1278 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 NAMPTP43490 491 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 DTHD1Q6ZMT9 781 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 GSTCDQ8NEC7 633 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 ZFP42Q96MM3 310 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 TMEM175Q9BSA9 504 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 SMOC1Q9H4F8 434 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 MIOSQ9NXC5 875 aa13.53□□□□□ -0.24
MRPS28-201ENST00000276585 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.24
MRPS28-201ENST00000276585 LAMA5O15230 3695 aa13.52□□□□□ -0.24
MRPS28-201ENST00000276585 VWA3AA6NCI4 1184 aa13.52□□□□□ -0.25
MRPS28-201ENST00000276585 ARL5CA6NH57 179 aa13.52□□□□□ -0.25
MRPS28-201ENST00000276585 NPTXRO95502 500 aa13.52□□□□□ -0.25
MRPS28-201ENST00000276585 EFEMP2O95967 443 aa13.52□□□□□ -0.25
MRPS28-201ENST00000276585 POMCP01189 267 aa13.52□□□□□ -0.25
MRPS28-201ENST00000276585 ITGA4P13612 1032 aa13.52□□□□□ -0.25
MRPS28-201ENST00000276585 MLH1P40692 756 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms