RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TMEM191BP0C7N4 346 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 MXI1P50539 228 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 DSC1Q08554 894 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 KRT39Q6A163 491 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 FAM117BQ6P1L5 589 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 TRAPPC11Q7Z392 1133 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 C1orf127Q8N9H9 656 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 BEST2Q8NFU1 509 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 MRPL9Q9BYD2 267 aaKnown RBP18.59■□□□□ 0.57
SKP2-201ENST00000274254 MMRN2Q9H8L6 949 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 DPP3Q9NY33 737 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 A0A1B0GTH6 734 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 P4HA2O15460 535 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
SKP2-201ENST00000274254 SERPINC1P01008 464 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 TNNC2P02585 160 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 TPM2P07951 284 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 LRPAP1P30533 357 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 SARM1Q6SZW1 724 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 CMTR2Q8IYT2 770 aaKnown RBP18.59■□□□□ 0.57
SKP2-201ENST00000274254 LRRC43Q8N309 656 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 TMEM130Q8N3G9 435 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 SIX4Q9UIU6 781 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 COQ4Q9Y3A0 265 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 GTPBP10A4D1E9 387 aaKnown RBP18.58■□□□□ 0.56
SKP2-201ENST00000274254 B4GALT3O60512 393 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 DDHD2O94830 711 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 GUCY2FP51841 1108 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 TUSC3Q13454 348 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 SCARA3Q6AZY7 606 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 ZNF280BQ86YH2 543 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 NAP1L5Q96NT1 182 aaPredicted RBP18.58■□□□□ 0.56
SKP2-201ENST00000274254 YME1L1Q96TA2 773 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 GOLGA2P5Q9HBQ8 144 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 RTN4Q9NQC3 1192 aaKnown RBP18.58■□□□□ 0.56
SKP2-201ENST00000274254 ITGA11Q9UKX5 1188 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 INSL6Q9Y581 213 aa18.58■□□□□ 0.56
SKP2-201ENST00000274254 ANO9A1A5B4 782 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 AP5Z1O43299 807 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 VNN1O95497 513 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 UBASH3AP57075 661 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 MYL7Q01449 175 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 RNASELQ05823 741 aaKnown RBP18.57■□□□□ 0.56
SKP2-201ENST00000274254 BIRC3Q13489 604 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 PAN2Q504Q3 1202 aaKnown RBP18.57■□□□□ 0.56
SKP2-201ENST00000274254 COLGALT2Q8IYK4 626 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 RAD9AQ99638 391 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 PRO3102Q9H379 93 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 NRDE2Q9H7Z3 1164 aa18.57■□□□□ 0.56
SKP2-201ENST00000274254 GOLGA6L3A6NEY3 463 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
SKP2-201ENST00000274254 CST3P01034 146 aaPredicted RBP18.56■□□□□ 0.56
SKP2-201ENST00000274254 ITGB3P05106 788 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 RPL9P32969 192 aaKnown RBP18.56■□□□□ 0.56
SKP2-201ENST00000274254 NR1I3Q14994 352 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 FILIP1LQ4L180 1135 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 EPC2Q52LR7 807 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 C9orf57Q5W0N0 161 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 FBXL13Q8NEE6 735 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 SP7Q8TDD2 431 aaPredicted RBP18.56■□□□□ 0.56
SKP2-201ENST00000274254 TAS1R2Q8TE23 839 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 ZBED2Q9BTP6 218 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 IFNKQ9P0W0 207 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 HCSTQ9UBK5 93 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
SKP2-201ENST00000274254 LAMA2P24043 3122 aaKnown RBP18.55■□□□□ 0.56
SKP2-201ENST00000274254 CASTOR2A6NHX0 329 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 PIRO00625 290 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 PHACTR2O75167 634 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 HLA-DRAP01903 254 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 POLR2BP30876 1174 aaKnown RBP18.55■□□□□ 0.56
SKP2-201ENST00000274254 NCOA4Q13772 614 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 BTG3Q14201 252 aaPredicted RBP18.55■□□□□ 0.56
SKP2-201ENST00000274254 GSE1Q14687 1217 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 UPP1Q16831 310 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 FKBP15Q5T1M5 1219 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 LMO3Q8TAP4 145 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 SEMA4DQ92854 862 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 UROC1Q96N76 676 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 FAM193BQ96PV7 902 aaPredicted RBP18.55■□□□□ 0.56
SKP2-201ENST00000274254 PAAF1Q9BRP4 392 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 CWH43Q9H720 699 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 RAB20Q9NX57 234 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 DNAJB4Q9UDY4 337 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 SCN1AP35498 2009 aa18.55■□□□□ 0.56
SKP2-201ENST00000274254 PPEF2O14830 753 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 TEX33O43247 280 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 TLL1O43897 1013 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 CLCNKBP51801 687 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 RBP5P82980 135 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 UBXN1Q04323 297 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 CETN1Q12798 172 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 FAM109BQ6ICB4 259 aaPredicted RBP18.54■□□□□ 0.56
SKP2-201ENST00000274254 DDX27Q96GQ7 796 aaKnown RBP18.54■□□□□ 0.56
SKP2-201ENST00000274254 ERGIC2Q96RQ1 377 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 TMEM175Q9BSA9 504 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
SKP2-201ENST00000274254 XYLT2Q9H1B5 865 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 GRPEL1Q9HAV7 217 aa18.54■□□□□ 0.56
SKP2-201ENST00000274254 AGAP1Q9UPQ3 857 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms