RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 HOXC10Q9NYD6 342 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 MROH7-TTC4A0A0A0MT08 1334 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 H0YC42 278 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 DFFAO00273 331 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TBC1D10CQ8IV04 446 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TADA1Q96BN2 335 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 WDR24Q96S15 920 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 SLC13A1Q9BZW2 595 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 POTECB2RU33 542 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 SLC16A4O15374 487 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 MAP3K13O43283 966 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 CSPG5O95196 566 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TMED10P49755 219 aaKnown RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 MED15Q96RN5 788 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 SMARCAL1Q9NZC9 954 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TUBGCP4Q9UGJ1 667 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ADGRB3O60242 1522 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 PSMD14O00487 310 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 CYP2E1P05181 493 aaPredicted RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ITIH4Q14624 930 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TBC1D10BQ4KMP7 808 aaPredicted RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TRAPPC11Q7Z392 1133 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 DDX42Q86XP3 938 aaKnown RBP eCLIP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 TTC30BQ8N4P2 665 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 FAM162AQ96A26 154 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ARHGEF38Q9NXL2 777 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 AIPL1Q9NZN9 384 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 NINQ8N4C6 2090 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 MYL3P08590 195 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ZNF473Q8WTR7 871 aaKnown RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 RSPH1Q8WYR4 309 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ARL8AQ96BM9 186 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ARHGEF26Q96DR7 871 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ASIC4Q96FT7 647 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 FAM213AQ9BRX8 229 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 FAM49AQ9H0Q0 323 aaPredicted RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 ASCC2Q9H1I8 757 aaPredicted RBP8.38□□□□□ -1.07
LIMD1-201ENST00000273317 APEX2Q9UBZ4 518 aa8.38□□□□□ -1.07
LIMD1-201ENST00000273317 EMSYQ7Z589 1322 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PSMA4P25789 261 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PDK1Q15118 436 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 ARHGAP27Q6ZUM4 889 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 SGMS1Q86VZ5 419 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CDR2LQ86X02 465 aaPredicted RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 SH3RF3Q8TEJ3 882 aaPredicted RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 MLXIPLQ9NP71 852 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 SNTNA6NMZ2 147 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 HMOX2P30519 316 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PLEKHA8Q96JA3 519 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CCT7Q99832 543 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 DHX35Q9H5Z1 703 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 EPS8L2Q9H6S3 715 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 NPHS2Q9NP85 383 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 NDFIP2Q9NV92 336 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 ADGRA3Q8IWK6 1321 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CCT8L1PA6NM43 557 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 ADCY3O60266 1144 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 LARGE1O95461 756 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 SLC9A1P19634 815 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 EDRF1Q3B7T1 1238 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 APBB2Q92870 758 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 RBM15Q96T37 977 aaKnown RBP eCLIP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PNPLA7Q6ZV29 1317 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CLRN2A0PK11 232 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 LRRIQ3A6PVS8 624 aaPredicted RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 E7ENQ6 273 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 M0R3G1 203 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 P4HBP07237 508 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 CDC25AP30304 524 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 ACTR2P61160 394 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 GTF2H3Q13889 308 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 LINC00523Q86TU6 105 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 B4GALNT2Q8NHY0 566 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 PRPF18Q99633 342 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 C7orf25Q9BPX7 421 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 OSBPL8Q9BZF1 889 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 NDUFA13Q9P0J0 144 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 ESYT3A0FGR9 886 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 POTEFA5A3E0 1075 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 KRT75O95678 551 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 POTEIP0CG38 1075 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 GYS2P54840 703 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 TJAP1Q5JTD0 557 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 POTEEQ6S8J3 1075 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 RNF25Q96BH1 459 aaPredicted RBP8.37□□□□□ -1.07
LIMD1-201ENST00000273317 SH3GL2Q99962 352 aa8.37□□□□□ -1.07
LIMD1-201ENST00000273317 DLC1Q96QB1 1528 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms