RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 CITO14578 2027 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 TADA2AO75478 443 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 B3GAT3O94766 335 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 DLATP10515 647 aaKnown RBP13.82□□□□□ -0.2
SS18-202ENST00000269138 CYP3A5P20815 502 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
SS18-202ENST00000269138 KRT17Q04695 432 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 DCLRE1AQ6PJP8 1040 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 DDX53Q86TM3 631 aaKnown RBP13.82□□□□□ -0.2
SS18-202ENST00000269138 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 BEST2Q8NFU1 509 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 OR5B17Q8NGF7 314 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 UROC1Q96N76 676 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 TSPAN18Q96SJ8 248 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 GAS2L1Q99501 681 aaPredicted RBP13.82□□□□□ -0.2
SS18-202ENST00000269138 GPR62Q9BZJ7 368 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 DPP3Q9NY33 737 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 ADAM28Q9UKQ2 775 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 MTCH2Q9Y6C9 303 aa13.82□□□□□ -0.2
SS18-202ENST00000269138 I3L4J1 428 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 EFEMP2O95967 443 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 LRPAP1P30533 357 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 RPL9P32969 192 aaKnown RBP13.81□□□□□ -0.2
SS18-202ENST00000269138 PPP1R2P41236 205 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 BRCC3P46736 316 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 UBE3AQ05086 875 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 LRRC63Q05C16 580 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 PAK1Q13153 545 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 KLHL40Q2TBA0 621 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 ZC3H3Q8IXZ2 948 aaKnown RBP13.81□□□□□ -0.2
SS18-202ENST00000269138 VPS52Q8N1B4 723 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 AUTS2Q8WXX7 1259 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 ZNF516Q92618 1163 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 MRPL38Q96DV4 380 aaKnown RBP13.81□□□□□ -0.2
SS18-202ENST00000269138 DDX27Q96GQ7 796 aaKnown RBP13.81□□□□□ -0.2
SS18-202ENST00000269138 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 MTMR12Q9C0I1 747 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 INTS13Q9NVM9 706 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 PUF60Q9UHX1 559 aaKnown RBP13.81□□□□□ -0.2
SS18-202ENST00000269138 LZTS1Q9Y250 596 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
SS18-202ENST00000269138 COL4A4P53420 1690 aaPredicted RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 CARNS1A5YM72 827 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 CETN3O15182 167 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 XPOTO43592 962 aaKnown RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 FOSL2P15408 326 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 POU3F3P20264 500 aaPredicted RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 PSMC2P35998 433 aaKnown RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 DLG4P78352 724 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 SURF1Q15526 300 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 NFKBIBQ15653 356 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 C1orf220Q5T0J3 134 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 C1orf127Q8N9H9 656 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 PARD3BQ8TEW8 1205 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 FNBP1Q96RU3 617 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 CGRRF1Q99675 332 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 LMAN2LQ9H0V9 348 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 TLR9Q9NR96 1032 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 ANK1P16157 1881 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 PLXNA4Q9HCM2 1894 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 LRRIQ3A6PVS8 624 aaPredicted RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 TMEM189-UBE2V1I3L0A0 370 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 PIRO00625 290 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 FSCN2O14926 492 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 TNNI1P19237 187 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 PTMSP20962 102 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 PTPROQ16827 1216 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 DUOXA2Q1HG44 320 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 PLPP4Q5VZY2 271 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 TMC7Q7Z402 723 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 NT5DC4Q86YG4 428 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 WDR49Q8IV35 697 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 RNF168Q8IYW5 571 aaPredicted RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 MICALL1Q8N3F8 863 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 MICAL1Q8TDZ2 1067 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
SS18-202ENST00000269138 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 TCF25Q9BQ70 676 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 ZBP1Q9H171 429 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 SIX4Q9UIU6 781 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 RWDD2AQ9UIY3 292 aa13.8□□□□□ -0.2
SS18-202ENST00000269138 CDH23Q9H251 3354 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 TRANK1O15050 2925 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 MYO7AQ13402 2215 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 BICDL2A1A5D9 508 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 HIDE1A8MVS5 230 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 MAPK13O15264 365 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 SPTLC1O15269 473 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 CXCL14O95715 111 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 SOD2P04179 222 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 ITGB3P05106 788 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 TMEM191BP0C7N4 346 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 TRIM49P0CI25 452 aa13.79□□□□□ -0.2
SS18-202ENST00000269138 TRIM49CP0CI26 452 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms