RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 SEMA4DQ92854 862 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 EPAS1Q99814 870 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 C10orf88Q9H8K7 445 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 RAB6BQ9NRW1 208 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 ABT1Q9ULW3 272 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 ZSCAN5CA6NGD5 496 aaPredicted RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 M0QYV0 167 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 KPNB1Q14974 876 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 PCSK7Q16549 785 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 DHX38Q92620 1227 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 RPF1Q9H9Y2 349 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 STMN3Q9NZ72 180 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 ABCB11O95342 1321 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 TMCC1O94876 653 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 IFNAR1P17181 557 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 SLC9A1P19634 815 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 TMEM79Q9BSE2 394 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 MRPL40Q9NQ50 206 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 CDYLQ9Y232 598 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 MYL2P10916 166 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 DHX34Q14147 1143 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 DNAL1Q4LDG9 190 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 ARID3BQ8IVW6 561 aaPredicted RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 SYTL1Q8IYJ3 562 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 DDX50Q9BQ39 737 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 C6orf62Q9GZU0 229 aaPredicted RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 SLITRK6Q9H5Y7 841 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 K7ERI5 159 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 SEMA3EO15041 775 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 HNRNPRO43390 633 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 SLC16A1P53985 500 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 FAM102AQ5T9C2 384 aaPredicted RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 FAXCQ5TGI0 409 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 C16orf89Q6UX73 402 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 NYAP1Q6ZVC0 841 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 SCUBE1Q8IWY4 988 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 AMNQ9BXJ7 453 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 KLHL4Q9C0H6 718 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 LY9Q9HBG7 655 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 FAM187AA6NFU0 413 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 ZNF233A6NK53 670 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 FAM196BA6NMK8 535 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 RHOBTB1O94844 696 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 MCAMP43121 646 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 RPS8P62241 208 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 KNOP1Q1ED39 458 aaKnown RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 ZNF699Q32M78 642 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 HORMAD1Q86X24 394 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 SLC44A5Q8NCS7 719 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 ZSCAN18Q8TBC5 510 aaPredicted RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 ATG4AQ8WYN0 398 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 GRIP2Q9C0E4 1043 aa8.35□□□□□ -1.07
CLTC-201ENST00000269122 PNMA8BQ9ULN7 279 aaPredicted RBP8.35□□□□□ -1.07
CLTC-201ENST00000269122 A0A0G2JLW4 131 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 FAM95CA0A1B0GW59 222 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 USP1O94782 785 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ADORA2BP29275 332 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 CACNB3P54284 484 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 DEFA1P59665 94 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 DEFA3P59666 94 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ZNF200P98182 395 aaPredicted RBP8.34□□□□□ -1.07
CLTC-201ENST00000269122 TAS2R42Q7RTR8 314 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 CHSY1Q86X52 802 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 VPS39Q96JC1 886 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 MCEEQ96PE7 176 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 OSBPL8Q9BZF1 889 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 SEMA6AQ9H2E6 1030 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ZSCAN32Q9NX65 697 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 SOX13Q9UN79 622 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 MIS18BP1Q6P0N0 1132 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 USP49Q70CQ1 688 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 RNF148Q8N7C7 305 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ZSWIM2Q8NEG5 633 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ATP6V0A4Q9HBG4 840 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 MYH6P13533 1939 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 NUP160Q12769 1436 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 PZPP20742 1482 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 TBC1D12O60347 775 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 MOCS2O96007 188 aaPredicted RBP8.34□□□□□ -1.07
CLTC-201ENST00000269122 ALBP02768 609 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ST13P50502 369 aaKnown RBP8.34□□□□□ -1.07
CLTC-201ENST00000269122 GALCP54803 685 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ROGDIQ9GZN7 287 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 EML4Q9HC35 981 aaKnown RBP8.34□□□□□ -1.07
CLTC-201ENST00000269122 PSMC3IPQ9P2W1 217 aaPredicted RBP8.34□□□□□ -1.07
CLTC-201ENST00000269122 MID2Q9UJV3 735 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 KIF1BO60333 1816 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 TMEM247A6NEH6 219 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 EPHB2P29323 1055 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 ITGADQ13349 1161 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 STAT4Q14765 748 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 CDC37Q16543 378 aaPredicted RBP8.34□□□□□ -1.07
CLTC-201ENST00000269122 AGBL2Q5U5Z8 902 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 SGF29Q96ES7 293 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 PDP2Q9P2J9 529 aa8.34□□□□□ -1.07
CLTC-201ENST00000269122 C2CD2Q9Y426 696 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms