RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 CPA5Q8WXQ8 436 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 METTL5Q9NRN9 209 aaKnown RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 C15orf41Q9Y2V0 281 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 NEU2Q9Y3R4 380 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 PCDHA10Q9Y5I2 948 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 ZBBXA8MT70 800 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 H3BRJ5 948 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.46
VPS33A-201ENST00000267199 SLC26A4O43511 780 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 MED7O43513 233 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 DNAJC8O75937 253 aaPredicted RBP12.21□□□□□ -0.46
VPS33A-201ENST00000267199 KRT38O76015 456 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 AMPD2Q01433 879 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 FUT2Q10981 343 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 ITIH4Q14624 930 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 KCTD2Q14681 263 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 TRADDQ15628 312 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 GLIS3Q8NEA6 775 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF507Q8TCN5 953 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.46
VPS33A-201ENST00000267199 MTBPQ96DY7 904 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 OLFM3Q96PB7 478 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 SERPINI1Q99574 410 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 AKT3Q9Y243 479 aa12.21□□□□□ -0.46
VPS33A-201ENST00000267199 EIF3DO15371 548 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 SERPINB3P29508 390 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 SNRNP35Q16560 246 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ARHGAP18Q8N392 663 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF668Q96K58 619 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 PAPOLBQ9NRJ5 636 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 REXO2Q9Y3B8 237 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 MAGEA4P43358 317 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 IL1RL1Q01638 556 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 SLC27A3Q5K4L6 730 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ANO5Q75V66 913 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 RTKN2Q8IZC4 609 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 TEX9Q8N6V9 391 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 HDAC11Q96DB2 347 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ACAP3Q96P50 834 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 POLR3CQ9BUI4 534 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 SHCBP1LQ9BZQ2 653 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ROPN1Q9HAT0 212 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF277Q9NRM2 450 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ABCF3Q9NUQ8 709 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 RHBDL2Q9NX52 303 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 PRPSAP2O60256 369 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 CASP2P42575 452 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ALDH5A1P51649 535 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 NPEPPSP55786 919 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 TRIP10Q15642 601 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 PREPLQ4J6C6 727 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 C2CD6Q53TS8 623 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF667Q5HYK9 610 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 PLA2G4FQ68DD2 849 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 POLR3FQ9H1D9 316 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 CDC42EP4Q9H3Q1 356 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 FBXO28Q9NVF7 368 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 UVRAGQ9P2Y5 699 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 AGO2Q9UKV8 859 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 PHTF1Q9UMS5 762 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 SMG5Q9UPR3 1016 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 MYO3BQ8WXR4 1341 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 EPHB6O15197 1021 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 HIC1Q14526 733 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 GRIK5Q16478 980 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 ENOSF1Q7L5Y1 443 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 TMC3Q7Z5M5 1100 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 HEXIM2Q96MH2 286 aaKnown RBP12.2□□□□□ -0.46
VPS33A-201ENST00000267199 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 TLK1Q9UKI8 766 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 FER1L4A9Z1Z3 1794 aa12.2□□□□□ -0.46
VPS33A-201ENST00000267199 VHLP40337 213 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 ELF3P78545 371 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-201ENST00000267199 SLC13A5Q86YT5 568 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-201ENST00000267199 ACTRT1Q8TDG2 376 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 PPP1R36Q96LQ0 422 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 EFHD1Q9BUP0 239 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 AKAP12Q02952 1782 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 ENTPD3O75355 529 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 TTC4O95801 387 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 KRT10P13645 584 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 ACOT2P49753 483 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
VPS33A-201ENST00000267199 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 SUPT3HO75486 399 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 MAPK6Q16659 721 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 HIC2Q96JB3 615 aa12.19□□□□□ -0.46
VPS33A-201ENST00000267199 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms