RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 APOL5Q9BWW9 433 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 NUP62CLQ9H1M0 184 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 MMRN2Q9H8L6 949 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.86□□□□□ -1.152e-6■■■■■ 223.6
DEPDC1B-201ENST00000265036 PUF60Q9UHX1 559 aaKnown RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 NUB1Q9Y5A7 615 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 PLXNA3P51805 1871 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 EXTL3O43909 919 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 KRT19P08727 400 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 KCNE1P15382 129 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 SCP2P22307 547 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 NR2F2P24468 414 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 MCM4P33991 863 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 PLCB3Q01970 1234 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 PSMD2Q13200 908 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 UPP1Q16831 310 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 XKR4Q5GH76 650 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 ZNF658Q5TYW1 1059 aaPredicted RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 KIAA1841Q6NSI8 718 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 FAM43BQ6ZT52 329 aaPredicted RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 XXYLT1Q8NBI6 393 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 OR5B17Q8NGF7 314 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 SPATA20Q8TB22 786 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 FEZF2Q8TBJ5 459 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 GSDMAQ96QA5 445 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 TMEM175Q9BSA9 504 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 ZBP1Q9H171 429 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLSTN2Q9H4D0 955 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLDND1Q9NY35 253 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 CDH22Q9UJ99 828 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 ITGB3P05106 788 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 URODP06132 367 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 KCNA5P22460 613 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TKTP29401 623 aaKnown RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 DLX2Q07687 328 aaPredicted RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 HYAL1Q12794 435 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 PTPN14Q15678 1187 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TIGD5Q53EQ6 642 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 GUF1Q8N442 669 aaKnown RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 PLEKHO2Q8TD55 490 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 RIN2Q8WYP3 895 aaPredicted RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 COLEC11Q9BWP8 271 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 SLC38A7Q9NVC3 462 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 RMND1Q9NWS8 449 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 BARX2Q9UMQ3 279 aaPredicted RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 UBQLN1Q9UMX0 589 aaKnown RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TSC2P49815 1807 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 SF3B1O75533 1304 aaKnown RBP eCLIP7.85□□□□□ -1.155e-6■■■■■ 85.6
DEPDC1B-201ENST00000265036 ZNF233A6NK53 670 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TBX10O75333 385 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 CXCL14O95715 111 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 SOD2P04179 222 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TMEM191BP0C7N4 346 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 SPATA31D3P0C874 917 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TRIM49P0CI25 452 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TRIM49CP0CI26 452 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TNNI1P19237 187 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 POLR2BP30876 1174 aaKnown RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 DLG4P78352 724 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 CD300LGQ6UXG3 332 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 SPATA31D4Q6ZUB0 917 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 DDX53Q86TM3 631 aaKnown RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 GZF1Q9H116 711 aaPredicted RBP7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 TLE6Q9H808 572 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 KIAA1468Q9P260 1216 aa7.85□□□□□ -1.15
DEPDC1B-201ENST00000265036 C2orf71A6NGG8 1288 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 PDXKO00764 312 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 SPTLC1O15269 473 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 GLP2RO95838 553 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 CTSAP10619 480 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 GLUD2P49448 558 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 CYP24A1Q07973 514 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 MORC3Q14149 939 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 DPCR1Q3MIW9 517 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 ZCWPW2Q504Y3 356 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 HSP90AA4PQ58FG1 418 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 C1orf127Q8N9H9 656 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 BEST2Q8NFU1 509 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 VN1R2Q8NFZ6 395 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 FNBP1Q96RU3 617 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 PLEKHA5Q9HAU0 1116 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 DPP3Q9NY33 737 aa7.84□□□□□ -1.15
DEPDC1B-201ENST00000265036 ADAM12O43184 909 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 CALUO43852 315 aaPredicted RBP7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 AKAP3O75969 853 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 LDHAP00338 332 aaKnown RBP7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 CNPP09543 421 aaKnown RBP7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 EPCAMP16422 314 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 NDUFV1P49821 464 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 ARPP19P56211 112 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 UBE3AQ05086 875 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 SMC1AQ14683 1233 aaKnown RBP7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 ZBTB6Q15916 424 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 KYAT1Q16773 422 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 SPATA1Q5VX52 437 aa7.84□□□□□ -1.16
DEPDC1B-201ENST00000265036 C9orf57Q5W0N0 161 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms