RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ABTB1Q969K4 478 aaPredicted RBP17.34■□□□□ 0.37
CTCF-201ENST00000264010 FIZ1Q96SL8 496 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 SLC1A1P43005 524 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 PMS2P54278 862 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 PTENP60484 403 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 LRRC23Q53EV4 343 aaPredicted RBP17.34■□□□□ 0.37
CTCF-201ENST00000264010 DNAJC24Q6P3W2 148 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 ANKRD31Q8N7Z5 1873 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 CPA5Q8WXQ8 436 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 TEPSINQ96N21 525 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 KIF9Q9HAQ2 790 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 COPB2P35606 906 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 RTP1P59025 263 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 KCNV1Q6PIU1 500 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 SLFN11Q7Z7L1 901 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 DHX38Q92620 1227 aaKnown RBP17.34■□□□□ 0.37
CTCF-201ENST00000264010 NLRP4Q96MN2 994 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 SENP7Q9BQF6 1050 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 NFKBIEO00221 500 aa17.33■□□□□ 0.37
CTCF-201ENST00000264010 GCNT1Q02742 428 aa17.33■□□□□ 0.37
CTCF-201ENST00000264010 CCDC38Q502W7 563 aa17.33■□□□□ 0.37
CTCF-201ENST00000264010 ARMC3Q5W041 872 aa17.33■□□□□ 0.37
CTCF-201ENST00000264010 B3GNT9Q6UX72 402 aa17.33■□□□□ 0.37
CTCF-201ENST00000264010 ZBED3Q96IU2 234 aaPredicted RBP17.33■□□□□ 0.37
CTCF-201ENST00000264010 PPP1R12AO14974 1030 aaPredicted RBP17.33■□□□□ 0.36
CTCF-201ENST00000264010 CORO7P57737 925 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 IGBP1P78318 339 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 DPY19L2Q6NUT2 758 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 THNSL1Q8IYQ7 743 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 MREGQ8N565 214 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 MYH10P35580 1976 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 SPATA31C2B4DYI2 1134 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 P4HA1P13674 534 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 ATF7P17544 494 aaPredicted RBP17.33■□□□□ 0.36
CTCF-201ENST00000264010 KCNA3P22001 575 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 TMOD1P28289 359 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 LMNB2Q03252 620 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 NCOA4Q13772 614 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 PDE1CQ14123 709 aaPredicted RBP17.33■□□□□ 0.36
CTCF-201ENST00000264010 SLC13A5Q86YT5 568 aaPredicted RBP17.33■□□□□ 0.36
CTCF-201ENST00000264010 ELP3Q9H9T3 547 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
CTCF-201ENST00000264010 CDK5RAP2Q96SN8 1893 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 EIF3HO15372 352 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTCF-201ENST00000264010 SLC8A1P32418 973 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 HOMEZQ8IX15 550 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 TMEM35BQ8NCS4 154 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 CNOT10Q9H9A5 744 aaKnown RBP17.32■□□□□ 0.36
CTCF-201ENST00000264010 DUOXA2Q1HG44 320 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 RASGEF1CQ8N431 466 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 RBBP8NLQ8NC74 664 aaPredicted RBP17.32■□□□□ 0.36
CTCF-201ENST00000264010 KCNK9Q9NPC2 374 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
CTCF-201ENST00000264010 KCNA2P16389 499 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 OSTNP61366 133 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 ATP11AP98196 1134 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 LRRC31Q6UY01 552 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 APBB1IPQ7Z5R6 666 aaPredicted RBP17.32■□□□□ 0.36
CTCF-201ENST00000264010 RHOT1Q8IXI2 618 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 CACNA2D3Q8IZS8 1091 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 RNF149Q8NC42 400 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 BTBD6Q96KE9 485 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 MFSD14AQ96MC6 490 aa17.32■□□□□ 0.36
CTCF-201ENST00000264010 NOP14P78316 857 aaKnown RBP17.31■□□□□ 0.36
CTCF-201ENST00000264010 CNTN2Q02246 1040 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
CTCF-201ENST00000264010 PSMD6Q15008 389 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 CLEC16AQ2KHT3 1053 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 IER5Q5VY09 327 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 TBC1D1Q86TI0 1168 aaPredicted RBP17.31■□□□□ 0.36
CTCF-201ENST00000264010 OR2W6PQ8NHA6 318 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 MIPOL1Q8TD10 442 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 ANAPC5Q9UJX4 755 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 SLC25A27O95847 323 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 PRKCBP05771 671 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 CALB1P05937 261 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 CUL2Q13617 745 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 C6orf118Q5T5N4 469 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 KAZNQ674X7 775 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 C12orf42Q96LP6 360 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 TSC22D3Q99576 134 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 RPF1Q9H9Y2 349 aaKnown RBP17.31■□□□□ 0.36
CTCF-201ENST00000264010 ZNF148Q9UQR1 794 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 LRRD1A4D1F6 860 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 SPDYE16A6NNV3 312 aaPredicted RBP17.31■□□□□ 0.36
CTCF-201ENST00000264010 ZNF862O60290 1169 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 CCNA1P78396 465 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 ADCY2Q08462 1091 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
CTCF-201ENST00000264010 ARMC9Q7Z3E5 817 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 RHPN2Q8IUC4 686 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 KCNV2Q8TDN2 545 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 C1orf54Q8WWF1 131 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 KREMEN1Q96MU8 473 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 SPATA33Q96N06 139 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 MMP19Q99542 508 aa17.31■□□□□ 0.36
CTCF-201ENST00000264010 TTC7AQ9ULT0 858 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms