RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CETN2P41208 172 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 PTP4A2Q12974 167 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 CUL3Q13618 768 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 RCN2Q14257 317 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 TNIP1Q15025 636 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 TRIP13Q15645 432 aaPredicted RBP13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 ACAD10Q6JQN1 1059 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 BTBD6Q96KE9 485 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 RBM15Q96T37 977 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 ANKFY1Q9P2R3 1169 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 TOM1O60784 492 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 CA4P22748 312 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 TRIM11Q96F44 468 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 C9orf72Q96LT7 481 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 FIZ1Q96SL8 496 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 CYLDQ9NQC7 956 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 SLC24A2Q9UI40 661 aa13.15□□□□□ -0.3
CHMP2B-201ENST00000263780 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 MAP3K7O43318 606 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 TUBP50607 506 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 FMO1Q01740 532 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 PPP1R15BQ5SWA1 713 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 C12orf56Q8IXR9 622 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 SCG3Q8WXD2 468 aaKnown RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 ZNF75CPQ92670 426 aaPredicted RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 NR1H4Q96RI1 486 aaPredicted RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 TIPINQ9BVW5 301 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 SLCO1B3Q9NPD5 702 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 NEU2Q9Y3R4 380 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 FAM170AA1A519 330 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 EML1O00423 815 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 ATP2A1O14983 1001 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 CYP26A1O43174 497 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 ATP9AO75110 1047 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 SLITRK3O94933 977 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 MYBL1P10243 752 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 SNRPFP62306 86 aaKnown RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 AP1B1Q10567 949 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 RCN1Q15293 331 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 KHDC1Q4VXA5 237 aaKnown RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 ATG4AQ8WYN0 398 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 MCUR1Q96AQ8 359 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 NSL1Q96IY1 281 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 FAM210AQ96ND0 272 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 BCAS3Q9H6U6 928 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 AVENQ9NQS1 362 aaPredicted RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 ANAPC7Q9UJX3 599 aa13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.14□□□□□ -0.31
CHMP2B-201ENST00000263780 A8MXQ7 604 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 GYG2O15488 501 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 ZBED4O75132 1171 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 HAUS5O94927 633 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 HLA-DOAP06340 250 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 RRM1P23921 792 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 MXI1P50539 228 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 PICALMQ13492 652 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 DAB2IPQ5VWQ8 1189 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 LRRC74BQ6ZQY2 392 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 GSTA5Q7RTV2 222 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 OTOAQ7RTW8 1153 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 MTDHQ86UE4 582 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 FBXO11Q86XK2 927 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 CLEC10AQ8IUN9 316 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 DRAXINQ8NBI3 349 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 SHC3Q92529 594 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 GORASP1Q9BQQ3 440 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 STX18Q9P2W9 335 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 ZNF536O15090 1300 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 PIK3CDO00329 1044 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 CYP11B1P15538 503 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms