RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 TMEM154Q6P9G4 183 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 KDELC2Q7Z4H8 507 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 BBS5Q8N3I7 341 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ICA1LQ8NDH6 482 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 WRNIP1Q96S55 665 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 AGXT2Q9BYV1 514 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 SPATA31A6Q5VVP1 1343 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 HSPA8P11142 646 aaKnown RBP14.31□□□□□ -0.12
TCF3-201ENST00000262965 RPA1P27694 616 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ADORA2BP29275 332 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 MAPK7Q13164 816 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 NME3Q13232 169 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 KCTD19Q17RG1 926 aaPredicted RBP14.31□□□□□ -0.12
TCF3-201ENST00000262965 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 SLC30A10Q6XR72 485 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ENOSF1Q7L5Y1 443 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 RNF139Q8WU17 664 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ING2Q9H160 280 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ZNF302Q9NR11 478 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 POLRMTO00411 1230 aaKnown RBP14.31□□□□□ -0.12
TCF3-201ENST00000262965 CCDC22O60826 627 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 SOX11P35716 441 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
TCF3-201ENST00000262965 RNF149Q8NC42 400 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 MTBPQ96DY7 904 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 CCDC90BQ9GZT6 254 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 SIK2Q9H0K1 926 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 PCMTD2Q9NV79 361 aa14.31□□□□□ -0.12
TCF3-201ENST00000262965 SMG5Q9UPR3 1016 aaKnown RBP14.31□□□□□ -0.12
TCF3-201ENST00000262965 CAMTA2O94983 1202 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 S100BP04271 92 aaPredicted RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 FAM153BP0C7A2 387 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 UBTFL6P0CB48 400 aaPredicted RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 KCNA3P22001 575 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 FAM153CQ494X1 144 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 FASTKD1Q53R41 847 aaKnown RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 TUFT1Q9NNX1 390 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 FAM153AQ9UHL3 310 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 TSR3Q9UJK0 312 aaKnown RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 ORC6Q9Y5N6 252 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 H3BRJ5 948 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 SEC24DO94855 1032 aaPredicted RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 STMN1P16949 149 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 COILP38432 576 aaPredicted RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 CIAPIN1Q6FI81 312 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 TRIM72Q6ZMU5 477 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 SLC13A5Q86YT5 568 aaPredicted RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 RBBP8NLQ8NC74 664 aaPredicted RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 OR6P1Q8NGX9 317 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 DNAJC9Q8WXX5 260 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 HAUS8Q9BT25 410 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 RANBP17Q9H2T7 1088 aaKnown RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 ZC3H7BQ9UGR2 993 aaKnown RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 SUN2Q9UH99 717 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 CST8O60676 142 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 RBP3P10745 1247 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 PON1P27169 355 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 SFNP31947 248 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 ARL13BQ3SXY8 428 aa14.3□□□□□ -0.12
TCF3-201ENST00000262965 AGGF1Q8N302 714 aaeCLIP14.3□□□□□ -0.121e-6■■■□□ 16.6
TCF3-201ENST00000262965 ALKBH8Q96BT7 664 aaKnown RBP14.3□□□□□ -0.12
TCF3-201ENST00000262965 MYBL1P10243 752 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SCTRP47872 440 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.127e-7■■■□□ 15
TCF3-201ENST00000262965 TRIP10Q15642 601 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 TBC1D16Q8TBP0 767 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 FSD1LQ9BXM9 530 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 PSMC3IPQ9P2W1 217 aaPredicted RBP14.29□□□□□ -0.12
TCF3-201ENST00000262965 ZNF711Q9Y462 761 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 E2F6O75461 281 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 MCF2P10911 925 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 ENO3P13929 434 aaPredicted RBP14.29□□□□□ -0.12
TCF3-201ENST00000262965 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 CCND1P24385 295 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 PRAMEP78395 509 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 PKN1Q16512 942 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 CENPPQ6IPU0 288 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SPIRE2Q8WWL2 714 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 MED24O75448 989 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 CIITAP33076 1130 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SERPINB4P48594 390 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 NSUN2Q08J23 767 aaKnown RBP eCLIP14.29□□□□□ -0.123e-15■■■■■ 184.8
TCF3-201ENST00000262965 SEC23AQ15436 765 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SUPT20HL1Q3ZLR7 823 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 RC3H1Q5TC82 1133 aaKnown RBP14.29□□□□□ -0.12
TCF3-201ENST00000262965 FAXCQ5TGI0 409 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 SLC30A9Q6PML9 568 aa14.29□□□□□ -0.12
TCF3-201ENST00000262965 ZNF571Q7Z3V5 609 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms