RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 NDST4Q9H3R1 872 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 TRIM10Q9UDY6 481 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 EEF2KO00418 725 aaKnown RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 SERPINI2O75830 405 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 CD4P01730 458 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ZNF177Q13360 481 aaPredicted RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 POM121L1PQ3SYA9 428 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ANKRD20A4Q4UJ75 823 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ANKRD20A8PQ5CZ79 823 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ANKRD20A2Q5SQ80 823 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 GJC2Q5T442 439 aaPredicted RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ANKRD20A1Q5TYW2 823 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 C7orf61Q8IZ16 206 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 PPM1NQ8N819 430 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 TM6SF1Q9BZW5 370 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 TMEM161AQ9NX61 479 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 CD274Q9NZQ7 290 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 PRR12Q9ULL5 1215 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 JRKLQ9Y4A0 524 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 TECPR2O15040 1411 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 IQANK1A0A1B0GTG1 560 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 CTNND1O60716 968 aaKnown RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 DR1Q01658 176 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 WDR75Q8IWA0 830 aaKnown RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ASAP3Q8TDY4 903 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 VCAM1P19320 739 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 PPM1LQ5SGD2 360 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 MAP4K1Q92918 833 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 FNDC3BQ53EP0 1204 aaKnown RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ALFQ53S48 1182 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ITPRIPL1Q6GPH6 555 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 SRRM1Q8IYB3 904 aaKnown RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 GTF2A1LQ9UNN4 478 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 SLC8A1P32418 973 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 EFNA5P52803 228 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 GRM4Q14833 912 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 SLC39A14Q15043 492 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 DGKHQ86XP1 1220 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 FAM136AQ96C01 138 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 ALDH2P05091 517 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 CLCN6P51797 869 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 PWP1Q13610 501 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 STARD3Q14849 445 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 PRAMEF19Q5SWL8 479 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 PDGFDQ9GZP0 370 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 NMRK2Q9NPI5 230 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SMPD4Q9NXE4 827 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 ZNF263O14978 683 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SUPT3HO75486 399 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 NCALDP61601 193 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 BEX3Q00994 111 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 KYAT1Q16773 422 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 A8MX80 341 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SCAMP3O14828 347 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 HSPA8P11142 646 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 DPCR1Q3MIW9 517 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 KIAA1324Q6UXG2 1013 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 IPMKQ8NFU5 416 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 HPS3Q969F9 1004 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 RBM41Q96IZ5 413 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 CAND2O75155 1236 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 GHRP10912 638 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 TNNI3P19429 210 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 GPS1Q13098 491 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 ZNF564Q8TBZ8 553 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 FAM20AQ96MK3 541 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 PGRMC1O00264 195 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 ITGB3P05106 788 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 GFPT1Q06210 699 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SFSWAPQ12872 951 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 CAMKK1Q8N5S9 505 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 POLD3Q15054 466 aaPredicted RBP16.68■□□□□ 0.26
SHANK3-201ENST00000262795 FLCNQ8NFG4 579 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 FAM151AQ8WW52 585 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 CYTH2Q99418 400 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 RUBCNLQ9H714 662 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 RWDD2AQ9UIY3 292 aa16.68■□□□□ 0.26
SHANK3-201ENST00000262795 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
SHANK3-201ENST00000262795 MANSC4A6NHS7 340 aaPredicted RBP16.67■□□□□ 0.26
SHANK3-201ENST00000262795 CYP26A1O43174 497 aa16.67■□□□□ 0.26
SHANK3-201ENST00000262795 KNOP1Q1ED39 458 aaKnown RBP16.67■□□□□ 0.26
SHANK3-201ENST00000262795 PRMT6Q96LA8 375 aaPredicted RBP16.67■□□□□ 0.26
SHANK3-201ENST00000262795 HTATIP2Q9BUP3 242 aa16.67■□□□□ 0.26
SHANK3-201ENST00000262795 FGFR1OP2Q9NVK5 253 aa16.67■□□□□ 0.26
SHANK3-201ENST00000262795 TUBE1Q9UJT0 475 aa16.67■□□□□ 0.26
SHANK3-201ENST00000262795 DTNAQ9Y4J8 743 aa16.67■□□□□ 0.26
SHANK3-201ENST00000262795 PDCD2Q16342 344 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms