RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SCNN1GP51170 649 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 CLLU1OSQ5K130 101 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 C1orf112Q9NSG2 853 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 VNN1O95497 513 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 TMEM191BP0C7N4 346 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 FPGSQ05932 587 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 C15orf39Q6ZRI6 1047 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 USP37Q86T82 979 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 HACE1Q8IYU2 909 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 MRFAP1L1Q96HT8 127 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 PI4K2AQ9BTU6 479 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 PLEKHA5Q9HAU0 1116 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 GCNT4Q9P109 453 aa29.67■■■□□ 2.34
SMARCD3-201ENST00000262188 POMCP01189 267 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 DEFB103AP81534 67 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 SOX4Q06945 474 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 KRT39Q6A163 491 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 TRAPPC11Q7Z392 1133 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 PCMTD1Q96MG8 357 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 SIK3Q9Y2K2 1263 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 EPHB6O15197 1021 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 CST3P01034 146 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 LRMPQ12912 555 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 SURF1Q15526 300 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 DUOXA2Q1HG44 320 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 ZACNQ401N2 412 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 XKR4Q5GH76 650 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 ZNF365Q70YC5 407 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 TMC6Q7Z403 805 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 C1orf127Q8N9H9 656 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 PGBD4Q96DM1 585 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 GIT1Q9Y2X7 761 aa29.66■■■□□ 2.34
SMARCD3-201ENST00000262188 TTC3P53804 2025 aa29.65■■■□□ 2.34
SMARCD3-201ENST00000262188 SKIP12755 728 aa29.65■■■□□ 2.34
SMARCD3-201ENST00000262188 VSTM4Q8IW00 320 aa29.65■■■□□ 2.34
SMARCD3-201ENST00000262188 RPUSD2Q8IZ73 545 aaKnown RBP29.65■■■□□ 2.34
SMARCD3-201ENST00000262188 FAM207AQ9NSI2 230 aaPredicted RBP29.65■■■□□ 2.34
SMARCD3-201ENST00000262188 PCDHB7Q9Y5E2 793 aa29.65■■■□□ 2.34
SMARCD3-201ENST00000262188 POU5F1Q01860 360 aaKnown RBP29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 FAM117BQ6P1L5 589 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 RABGGTAQ92696 567 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 ANKRD36BP1Q96IX9 119 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 RPS6KC1Q96S38 1066 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 LSM14BQ9BX40 385 aaKnown RBP29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 TMEM161AQ9NX61 479 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 SIX4Q9UIU6 781 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 PPEF2O14830 753 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 EOMESO95936 686 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 HLA-DRAP01903 254 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 PON1P27169 355 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 ZBTB6Q15916 424 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 EXOC3L4Q17RC7 722 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 EPC2Q52LR7 807 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 GJB7Q6PEY0 223 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 CRIPAKQ8N1N5 446 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 LMO3Q8TAP4 145 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 ERGIC2Q96RQ1 377 aa29.64■■■□□ 2.34
SMARCD3-201ENST00000262188 PDCD11Q14690 1871 aaKnown RBP29.64■■■□□ 2.33
SMARCD3-201ENST00000262188 STX10O60499 249 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 PHACTR2O75167 634 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 TNNC2P02585 160 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 ITGB3P05106 788 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 KRT19P08727 400 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 KCNE1P15382 129 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 IGFBP6P24592 240 aaPredicted RBP29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 GTF2H1P32780 548 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 ENPEPQ07075 957 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 PPIGQ13427 754 aaKnown RBP eCLIP29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 GBP6Q6ZN66 633 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 DRC7Q8IY82 874 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 INTS2Q9H0H0 1204 aaKnown RBP29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 DPP3Q9NY33 737 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 HCSTQ9UBK5 93 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 LRFN2Q9ULH4 789 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 C2CD2Q9Y426 696 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 PIK3CAP42336 1068 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 GOLGA8FQ08AF8 430 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 GOLGA8DPQ0D2H9 430 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 SPOPLQ6IQ16 392 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 CD302Q8IX05 232 aa29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 PPP1R10Q96QC0 940 aaKnown RBP29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.63■■■□□ 2.33
SMARCD3-201ENST00000262188 WDR5P61964 334 aaKnown RBP29.62■■■□□ 2.33
SMARCD3-201ENST00000262188 DPY19L2P1Q6NXN4 242 aa29.62■■■□□ 2.33
SMARCD3-201ENST00000262188 FBXL13Q8NEE6 735 aa29.62■■■□□ 2.33
SMARCD3-201ENST00000262188 CXorf38Q8TB03 319 aa29.62■■■□□ 2.33
SMARCD3-201ENST00000262188 AJAP1Q9UKB5 411 aaPredicted RBP29.62■■■□□ 2.33
SMARCD3-201ENST00000262188 ZBBXA8MT70 800 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 B4GALT3O60512 393 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 NAB2Q15742 525 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 SIX2Q9NPC8 291 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 RAB20Q9NX57 234 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 CXXC1Q9P0U4 656 aaPredicted RBP29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 ABHD14A-ACY1A0A1B0GW23 586 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 RNF225M0QZC1 329 aaPredicted RBP29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 N4BP1O75113 896 aaKnown RBP29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 CLSTN1O94985 981 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 POLR2BP30876 1174 aaKnown RBP29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 MYL6P60660 151 aa29.61■■■□□ 2.33
SMARCD3-201ENST00000262188 NCOA4Q13772 614 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms