RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ZKSCAN4Q969J2 545 aaPredicted RBP17.44■□□□□ 0.38
TM9SF1-201ENST00000261789 SNF8Q96H20 258 aa17.44■□□□□ 0.38
TM9SF1-201ENST00000261789 ZBTB45Q96K62 511 aaPredicted RBP17.44■□□□□ 0.38
TM9SF1-201ENST00000261789 ABCF3Q9NUQ8 709 aa17.44■□□□□ 0.38
TM9SF1-201ENST00000261789 FZD1Q9UP38 647 aa17.44■□□□□ 0.38
TM9SF1-201ENST00000261789 TCP11X1B4DZS4 312 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 RGS20O76081 388 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 NR3C2P08235 984 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 CETPP11597 493 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 CD58P19256 250 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 GCNT1Q02742 428 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 MPP2Q14168 576 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 CCDC60Q8IWA6 550 aaPredicted RBP17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 PARP9Q8IXQ6 854 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 TTLL6Q8N841 843 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 LPAR1Q92633 364 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 PLVAPQ9BX97 442 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 FGFR1OP2Q9NVK5 253 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■■□□ 15
TM9SF1-201ENST00000261789 ITIH2P19823 946 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 NF2P35240 595 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 MCCD1P59942 119 aaPredicted RBP17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 MAP3K10Q02779 954 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 CXCL9Q07325 125 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 SEZ6Q53EL9 994 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 TDRD10Q5VZ19 366 aaKnown RBP17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 VSTM1Q6UX27 236 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 SLC17A8Q8NDX2 589 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 C9orf72Q96LT7 481 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 ANAPC5Q9UJX4 755 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 PSME4Q14997 1843 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
TM9SF1-201ENST00000261789 THAP12O43422 761 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 TTC4O95801 387 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 HLA-DRAP01903 254 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 MTERF2Q49AM1 385 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 ATP13A4Q4VNC1 1196 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 VSIG10LQ86VR7 867 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 SPIRE2Q8WWL2 714 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 SLCO2A1Q92959 643 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 SGSM3Q96HU1 749 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 HAPLN2Q9GZV7 340 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 STMN4Q9H169 189 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 POLR3FQ9H1D9 316 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 PCDHB2Q9Y5E7 798 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 KIAA1217Q5T5P2 1943 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 VWA5AO00534 786 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 HGSO14964 777 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 ATF2P15336 505 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 GTF2H1P32780 548 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 PIK3CAP42336 1068 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 PTK6Q13882 451 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 TMEM270Q6UE05 265 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 SAMD3Q8N6K7 520 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 TMEM143Q96AN5 459 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 ROPN1BQ9BZX4 212 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 ROPN1Q9HAT0 212 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 APOBEC3GQ9HC16 384 aaKnown RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 MYOZ2Q9NPC6 264 aa17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 TPX2Q9ULW0 747 aaKnown RBP17.42■□□□□ 0.38
TM9SF1-201ENST00000261789 UMODL1Q5DID0 1318 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 ZBED4O75132 1171 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 TCF4P15884 667 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 LIG4P49917 911 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 PRKCEQ02156 737 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 XRCC4Q13426 336 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 C15orf39Q6ZRI6 1047 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 MON1BQ7L1V2 547 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 TRPM8Q7Z2W7 1104 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 USP37Q86T82 979 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 FNBP1Q96RU3 617 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 CCDC134Q9H6E4 229 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 NINJ2Q9NZG7 142 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 PI4K2BG5E9Z4 385 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 VNN1O95497 513 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 KCNA2P16389 499 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 ZKSCAN8Q15776 578 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 WDR44Q5JSH3 913 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 HP1BP3Q5SSJ5 553 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 CROCCP2Q86T23 111 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 CEP57Q86XR8 500 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 ATL2Q8NHH9 583 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 PDLIM7Q9NR12 457 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 ZNRF3Q9ULT6 936 aa17.41■□□□□ 0.38
TM9SF1-201ENST00000261789 AGAP1Q9UPQ3 857 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms