RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DYRK4Q9NR20 520 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PPP1R9AQ9ULJ8 1098 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 FGGP02679 453 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CYP3A4P08684 503 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GTF2H3Q13889 308 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 EPM2AIP1Q7L775 607 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 C1orf131Q8NDD1 294 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 STARD8Q92502 1023 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 UROC1Q96N76 676 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM106CQ9BVX2 250 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CDY2AQ9Y6F7 541 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CDY1Q9Y6F8 540 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CLRN2A0PK11 232 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 EIF2AK2P19525 551 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SKP1P63208 163 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 C11orf63Q6NUN7 778 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SRBD1Q8N5C6 995 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 LZTR1Q8N653 840 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 OR9Q1Q8NGQ5 310 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 EDC3Q96F86 508 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 THOC1Q96FV9 657 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ASB7Q9H672 318 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MYOZ2Q9NPC6 264 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 POTEB3A0JP26 581 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 C3orf70A6NLC5 250 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PRKAB2O43741 272 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 TTLL9Q3SXZ7 439 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MEI1Q5TIA1 1274 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ARMC3Q5W041 872 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 BTBD8Q5XKL5 378 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 POTEBQ6S5H4 581 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 TBC1D1Q86TI0 1168 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NLRP4Q96MN2 994 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 TRIM31Q9BZY9 425 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 COL1A2P08123 1366 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ZC3H4Q9UPT8 1303 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 H3BQF6 201 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PIK3CDO00329 1044 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RFX5P48382 616 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CASP8Q14790 479 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MORF4L2Q15014 288 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 DIXDC1Q155Q3 683 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 BTNL9Q6UXG8 535 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ZPBP2Q6X784 338 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CMTR1Q8N1G2 835 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CCNYQ8ND76 341 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SLITRK1Q96PX8 696 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RIOX1Q9H6W3 641 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PIK3C2AO00443 1686 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ZBTB22O15209 634 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MAPK1P28482 360 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PSMC1P62191 440 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 EMC2Q15006 297 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM270Q6UE05 265 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 USP50Q70EL3 339 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 KRCC1Q9NPI7 259 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 HSPBP1Q9NZL4 362 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CNOT7Q9UIV1 285 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MYH11P35749 1972 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MROH7Q68CQ1 1323 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SPDYE16A6NNV3 312 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 DCDC2CA8MYV0 355 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NR1I3Q14994 352 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SPDYE2Q495Y8 402 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NAPEPLDQ6IQ20 393 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SPATA2LQ8IUW3 424 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SCOCQ9UIL1 159 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PPP2R2AP63151 447 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NCOA4Q13772 614 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RABGAP1LQ5R372 815 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NXNQ6DKJ4 435 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 WDR49Q8IV35 697 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SPICE1Q8N0Z3 855 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PCYOX1LQ8NBM8 494 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ASB2Q96Q27 587 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 AAR2Q9Y312 384 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF839A8K0R7 811 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ERI2A8K979 691 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 BUB1O43683 1085 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 C21orf2O43822 256 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RASA1P20936 1047 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PRDX5P30044 214 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CLNS1AP54105 237 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NAA25Q14CX7 972 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RDH13Q8NBN7 331 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 DDX17Q92841 729 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 FBXO44Q9H4M3 255 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 UXTQ9UBK9 157 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 TEKT2Q9UIF3 430 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ADGRG1Q9Y653 693 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ARHGAP10A1A4S6 786 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NDUFB10O96000 172 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 GNRH1P01148 92 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 HSPA1AP0DMV8 641 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 HSPA1BP0DMV9 641 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 BASP1P80723 227 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PPIL2Q13356 520 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SNRNP35Q16560 246 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 NT5DC1Q5TFE4 455 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 C11orf57Q6ZUT1 292 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms