RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 USP17L2Q6R6M4 530 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 POTEBQ6S5H4 581 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ABTB1Q969K4 478 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 NSUN4Q96CB9 384 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 FAM161BQ96MY7 647 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 TTC1Q99614 292 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 AGPAT1Q99943 283 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 NDE1Q9NXR1 346 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 EURLQ9NYK6 297 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 CLIC5Q9NZA1 410 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SLAIN2Q9P270 581 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 DDX25Q9UHL0 483 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 TBC1D30Q9Y2I9 924 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF804BA4D1E1 1349 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ROBO1Q9Y6N7 1651 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 PCNTO95613 3336 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 TULP1O00294 542 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SLC16A3O15427 465 aaKnown RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 EDIL3O43854 480 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 HNRNPCP07910 306 aaKnown RBP eCLIP7.66□□□□□ -1.183e-6■■■□□ 18.5
CSDE1-201ENST00000261443 CRABP2P29373 138 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 HOXD13P35453 343 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 ADCY7P51828 1080 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 PTK6Q13882 451 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 TTLL12Q14166 644 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 P3H1Q32P28 736 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 ARSHQ5FYA8 562 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 LVRNQ6Q4G3 990 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 PHLDB2Q86SQ0 1253 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SFR1Q86XK3 245 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 CPNE8Q86YQ8 564 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 RNF168Q8IYW5 571 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 ATG4AQ8WYN0 398 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 HAUS1Q96CS2 278 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 CLMNQ96JQ2 1002 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 AGBL1Q96MI9 1066 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 CYTH2Q99418 400 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 PHACTR1Q9C0D0 580 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 KIAA1586Q9HCI6 787 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 ROBO3Q96MS0 1386 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 WDR91A4D1P6 747 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 LRRN2O75325 713 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 FGFR1P11362 822 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SLC18A1P54219 525 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 AP2B1P63010 937 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 HPCAP84074 193 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 CDC16Q13042 620 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SEPT7Q16181 437 aaKnown RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 MAPK6Q16659 721 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 HYIQ5T013 277 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 C6orf163Q5TEZ5 329 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SYDE1Q6ZW31 735 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SATL1Q86VE3 508 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 MORC4Q8TE76 937 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 GRK7Q8WTQ7 553 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 SLC20A1Q8WUM9 679 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 HAS1Q92839 578 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 CD101Q93033 1021 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 COA7Q96BR5 231 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 DNAJC1Q96KC8 554 aaKnown RBP7.66□□□□□ -1.18
CSDE1-201ENST00000261443 BTBD6Q96KE9 485 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 TTC25Q96NG3 672 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 PLVAPQ9BX97 442 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 TRIM55Q9BYV6 548 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 GPR88Q9GZN0 384 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 EBF3Q9H4W6 596 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 CHST7Q9NS84 486 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 TMOD3Q9NYL9 352 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 KANSL3Q9P2N6 904 aa7.66□□□□□ -1.18
CSDE1-201ENST00000261443 FRMPD4Q14CM0 1322 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 A0A0J9YVX5 310 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 ESYT2A0FGR8 921 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 WTIPA6NIX2 430 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 ATMINO43313 823 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 RAD21O60216 631 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 SORBS3O60504 671 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 CYP19A1P11511 503 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 PIK3CAP42336 1068 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 MAGEA4P43358 317 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 ARFIP2P53365 341 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 TMEM259Q4ZIN3 620 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 KLC3Q6P597 504 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 MRRFQ96E11 262 aaKnown RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 CFAP57Q96MR6 1250 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 CATSPER2Q96P56 530 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 OSBPL8Q9BZF1 889 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 FBXO6Q9NRD1 293 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 ASTN1O14525 1302 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 COL5A3P25940 1745 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 SMIM31A0A1B0GVY4 71 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 F8W8V4 182 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 FSCN2O14926 492 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 CIB2O75838 187 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 OR6B1O95007 311 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 HARSP12081 509 aaKnown RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 MAN1A1P33908 653 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 FMO5P49326 533 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 MAP3K10Q02779 954 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 TMED1Q13445 227 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms