RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 CSDE1O75534 798 aaKnown RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 CTNNA2P26232 953 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 GNA15P30679 374 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 TCF7P36402 384 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 CAPSQ13938 189 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 TMEM132AQ24JP5 1023 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 ZACNQ401N2 412 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 DENND2CQ68D51 928 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 SEC14L1Q92503 715 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 ACSF2Q96CM8 615 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 PORCNQ9H237 461 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 UVRAGQ9P2Y5 699 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 PI4K2BG5E9Z4 385 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 DDNO94850 711 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 CST3P01034 146 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 UNGP13051 313 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 STAT5BP51692 787 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 GCNT1Q02742 428 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 PSMD6Q15008 389 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 ATP13A4Q4VNC1 1196 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 EPS8L3Q8TE67 593 aaKnown RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 TMEM174Q8WUU8 243 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 PRPF31Q8WWY3 499 aaKnown RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 C12orf42Q96LP6 360 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 AZI2Q9H6S1 392 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 ADAM22Q9P0K1 906 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 PCDHB2Q9Y5E7 798 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 DOCK1Q14185 1865 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 ZNFX1Q9P2E3 1918 aaKnown RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 FOXO6A8MYZ6 492 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 PMM2O15305 246 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 PPFIA2O75334 1257 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 GTF2H1P32780 548 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 NOP14P78316 857 aaKnown RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 KRT17Q04695 432 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 CUL2Q13617 745 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 SIX1Q15475 284 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 KAZNQ674X7 775 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 NLRP14Q86W24 1093 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 THNSL1Q8IYQ7 743 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 MICALL1Q8N3F8 863 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 RBBP8NLQ8NC74 664 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 ZNF473Q8WTR7 871 aaKnown RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 CCT8L2Q96SF2 557 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 EPN3Q9H201 632 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 EPB41L4BQ9H329 900 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 CD2APQ9Y5K6 639 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 RLFQ13129 1914 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 ACSL3O95573 720 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 ECEL1O95672 775 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 PPP2R2AP63151 447 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 C15orf39Q6ZRI6 1047 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 EIF1ADQ8N9N8 165 aaKnown RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 COPS5Q92905 334 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 DDX23Q9BUQ8 820 aaKnown RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 MTMR12Q9C0I1 747 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 MTA2O94776 668 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 ARIH2O95376 493 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 TAS2R40P59535 323 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 NCOA4Q13772 614 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 RNF149Q8NC42 400 aa12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
SLC3A1-201ENST00000260649 SSC5DA1L4H1 1573 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 IRF6O14896 467 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 RALAP11233 206 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 TCF4P15884 667 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 ARL2P36404 184 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 NAMPTP43490 491 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 CORO7P57737 925 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 TFAMQ00059 246 aaKnown RBP12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 ORC1Q13415 861 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 HSDL1Q3SXM5 330 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 MYCBPAPQ8TBZ2 947 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 NLRP4Q96MN2 994 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 PABPC3Q9H361 631 aaKnown RBP12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 PCYOX1Q9UHG3 505 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 ATP2C2O75185 946 aa12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
SLC3A1-201ENST00000260649 BRD2P25440 801 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms