RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 FNBP1Q96RU3 617 aa22.39■■□□□ 1.17
RTCA-201ENST00000260563 NKX2-4Q9H2Z4 354 aa22.39■■□□□ 1.17
RTCA-201ENST00000260563 CWH43Q9H720 699 aa22.39■■□□□ 1.17
RTCA-201ENST00000260563 UBQLN1Q9UMX0 589 aaKnown RBP22.39■■□□□ 1.17
RTCA-201ENST00000260563 C2CD2Q9Y426 696 aa22.39■■□□□ 1.17
RTCA-201ENST00000260563 PLXNA4Q9HCM2 1894 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 LINC01553A4QN01 128 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 DLATP10515 647 aaKnown RBP22.38■■□□□ 1.17
RTCA-201ENST00000260563 KRT13P13646 458 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 TUSC3Q13454 348 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 NR1I3Q14994 352 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 NAB2Q15742 525 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 VWA3BQ502W6 1294 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 MIIPQ5JXC2 388 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 PPP2R2DQ66LE6 453 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 USP37Q86T82 979 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 ZNF280BQ86YH2 543 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 EFCAB13Q8IY85 973 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 CCDC127Q96BQ5 260 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 NRDE2Q9H7Z3 1164 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 RTN4Q9NQC3 1192 aaKnown RBP22.38■■□□□ 1.17
RTCA-201ENST00000260563 RWDD3Q9Y3V2 267 aa22.38■■□□□ 1.17
RTCA-201ENST00000260563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.38■■□□□ 1.17
RTCA-201ENST00000260563 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.38■■□□□ 1.17
RTCA-201ENST00000260563 DDHD2O94830 711 aa22.37■■□□□ 1.17
RTCA-201ENST00000260563 LAG3P18627 525 aa22.37■■□□□ 1.17
RTCA-201ENST00000260563 DSC1Q08554 894 aa22.37■■□□□ 1.17
RTCA-201ENST00000260563 CLP1Q92989 425 aaKnown RBP22.37■■□□□ 1.17
RTCA-201ENST00000260563 TIFAQ96CG3 184 aa22.37■■□□□ 1.17
RTCA-201ENST00000260563 CGRRF1Q99675 332 aa22.37■■□□□ 1.17
RTCA-201ENST00000260563 INTS13Q9NVM9 706 aa22.37■■□□□ 1.17
RTCA-201ENST00000260563 COL4A4P53420 1690 aaPredicted RBP22.37■■□□□ 1.17
RTCA-201ENST00000260563 CASTOR2A6NHX0 329 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 LGALS16A8MUM7 142 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 PES1O00541 588 aaKnown RBP22.36■■□□□ 1.17
RTCA-201ENST00000260563 B4GALT3O60512 393 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 BFSP1Q12934 665 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 DCAF17Q5H9S7 520 aaPredicted RBP22.36■■□□□ 1.17
RTCA-201ENST00000260563 WDR49Q8IV35 697 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 COLGALT2Q8IYK4 626 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 BEST2Q8NFU1 509 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 C18orf25Q96B23 403 aaPredicted RBP22.36■■□□□ 1.17
RTCA-201ENST00000260563 TMEM175Q9BSA9 504 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 NDST4Q9H3R1 872 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 SLC28A3Q9HAS3 691 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 AAASQ9NRG9 546 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 DNAJB4Q9UDY4 337 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 TUBGCP4Q9UGJ1 667 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 CARNS1A5YM72 827 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 ARHGEF15O94989 841 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 TMEM191BP0C7N4 346 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 TNNI1P19237 187 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 CYP3A5P20815 502 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 TFAMQ00059 246 aaKnown RBP22.36■■□□□ 1.17
RTCA-201ENST00000260563 TCERG1LQ5VWI1 586 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 LMBRD2Q68DH5 695 aaPredicted RBP22.36■■□□□ 1.17
RTCA-201ENST00000260563 PARD3BQ8TEW8 1205 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 CACTINQ8WUQ7 758 aaKnown RBP22.36■■□□□ 1.17
RTCA-201ENST00000260563 ANKRD36BP1Q96IX9 119 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 GOLGA2P5Q9HBQ8 144 aa22.36■■□□□ 1.17
RTCA-201ENST00000260563 LRRIQ3A6PVS8 624 aaPredicted RBP22.35■■□□□ 1.17
RTCA-201ENST00000260563 TEX33O43247 280 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 LINC00271P0C7V0 271 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 OR1G1P47890 313 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 VAMP7P51809 220 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 BCAR1P56945 870 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 TAP1Q03518 808 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 UBXN1Q04323 297 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 SOX4Q06945 474 aaPredicted RBP22.35■■□□□ 1.17
RTCA-201ENST00000260563 ZBTB6Q15916 424 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 COLGALT1Q8NBJ5 622 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 PLEKHO2Q8TD55 490 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 TMC2Q8TDI7 906 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 SLC35C1Q96A29 364 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 UROC1Q96N76 676 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 ZNF558Q96NG5 402 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 TGS1Q96RS0 853 aaKnown RBP22.35■■□□□ 1.17
RTCA-201ENST00000260563 MTMR12Q9C0I1 747 aa22.35■■□□□ 1.17
RTCA-201ENST00000260563 PTPRJQ12913 1337 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 SCN1AP35498 2009 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 TNNC2P02585 160 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 CDC25BP30305 580 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 CTNNB1P35222 781 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 ALDH7A1P49419 539 aaKnown RBP22.34■■□□□ 1.17
RTCA-201ENST00000260563 MCCD1P59942 119 aaPredicted RBP22.34■■□□□ 1.17
RTCA-201ENST00000260563 ENPEPQ07075 957 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 KCNH2Q12809 1159 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 KCNT2Q6UVM3 1135 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.34■■□□□ 1.17
RTCA-201ENST00000260563 SAMD11Q96NU1 681 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 POP1Q99575 1024 aaKnown RBP22.34■■□□□ 1.17
RTCA-201ENST00000260563 PCDHB12Q9Y5F1 795 aa22.34■■□□□ 1.17
RTCA-201ENST00000260563 AFPP02771 609 aaKnown RBP22.33■■□□□ 1.17
RTCA-201ENST00000260563 PBX3P40426 434 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 SLC11A1P49279 550 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 DLG4P78352 724 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 FKBP15Q5T1M5 1219 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 C17orf80Q9BSJ5 609 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 DPP3Q9NY33 737 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 CACNG4Q9UBN1 327 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms