RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 FAM110CQ1W6H9 321 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SYTL3Q4VX76 610 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ANKS4BQ8N8V4 417 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ACRBPQ8NEB7 543 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 UCMAQ8WVF2 138 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 DCUN1D1Q96GG9 259 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 EDEM3Q9BZQ6 932 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CYP39A1Q9NYL5 469 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TRPM5Q9NZQ8 1165 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 DDX20Q9UHI6 824 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PPP2R2CQ9Y2T4 447 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CNTNAP2Q9UHC6 1331 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CFAP69A5D8W1 941 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 GOLGA8MH3BSY2 632 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 KIAA0391O15091 583 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SEPT4O43236 478 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 RNASEH1O60930 286 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 MED24O75448 989 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 HLA-DRAP01903 254 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SERPIND1P05546 499 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 INHBAP08476 426 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SMARCA1P28370 1054 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CD52P31358 61 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 AKT1P31749 480 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 NAMPTP43490 491 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SLC26A2P50443 739 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 EFEMP1Q12805 493 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TTC8Q8TAM2 541 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CYP2W1Q8TAV3 490 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 EPAS1Q99814 870 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 VPS18Q9P253 973 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PIK3C2AO00443 1686 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 MYMKA6NI61 221 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 LRRC53A6NM62 1247 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PPFIA4O75335 1185 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TGFB3P10600 412 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 BRD2P25440 801 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 MLH1P40692 756 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 DEUP1Q05D60 604 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 GFPT1Q06210 699 aaPredicted RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PSMD6Q15008 389 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PCSK7Q16549 785 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ACOT1Q86TX2 421 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 RMDN2Q96LZ7 410 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 DNAJC17Q9NVM6 304 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TACC3Q9Y6A5 838 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CXCL8P10145 99 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ACO1P21399 889 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 HSD17B4P51659 736 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 DRP2Q13474 957 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TTC23LQ6PF05 361 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 EFHBQ8N7U6 833 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 RBBP8NLQ8NC74 664 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 MAP3K14Q99558 947 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 RANBP17Q9H2T7 1088 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 SMPD4Q9NXE4 827 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 NT5C1B-RDH14C9J2C7 533 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TSPAN3O60637 253 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 UBA1P22314 1058 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 RPA1P27694 616 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 AMPD2Q01433 879 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF564Q8TBZ8 553 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 AP1M1Q9BXS5 423 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 PORCNQ9H237 461 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 KCND2Q9NZV8 630 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CEP72Q9P209 647 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 MRPL42Q9Y6G3 142 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 GPR25O00155 361 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 EEF2KO00418 725 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 PRPF4O43172 522 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TJP3O95049 919 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ECEL1O95672 775 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TUBB4AP04350 444 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CDH6P55285 790 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 PPIGQ13427 754 aaKnown RBP eCLIP6.73□□□□□ -1.333e-6■■■□□ 17.4
BRIP1-201ENST00000259008 SLMAPQ14BN4 828 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 SETDB1Q15047 1291 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 MAPRE1Q15691 268 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 HEATR6Q6AI08 1181 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TRIM48Q8IWZ4 208 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ATPAF2Q8N5M1 289 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CORO1BQ9BR76 489 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 IP6K2Q9UHH9 426 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 FBXO2Q9UK22 296 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ABCC6O95255 1503 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 NVLO15381 856 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 SART1O43290 800 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ACAT1P24752 427 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 SLC11A2P49281 568 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 RPL10AP62906 217 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 NOP14P78316 857 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 SLC39A12Q504Y0 691 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 HABP4Q5JVS0 413 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TTC19Q6DKK2 380 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 SPOPLQ6IQ16 392 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ALKBH5Q6P6C2 394 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms