RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FTLP02792 175 aaPredicted RBP29.7■■■□□ 2.35
CCM2-201ENST00000258781 KRT5P13647 590 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 ABCB4P21439 1286 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 TBXAS1P24557 533 aaPredicted RBP29.7■■■□□ 2.35
CCM2-201ENST00000258781 CXCR5P32302 372 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 TMEM132AQ24JP5 1023 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 MAP3K21Q5TCX8 1036 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 TMCO3Q6UWJ1 677 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 RHOT2Q8IXI1 618 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 DDX1Q92499 740 aaKnown RBP29.7■■■□□ 2.35
CCM2-201ENST00000258781 PSMB7Q99436 277 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 THAP2Q9H0W7 228 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 CCDC151A5D8V7 595 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 KIF4AO95239 1232 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 C6orf222P0C671 652 aaPredicted RBP29.7■■■□□ 2.34
CCM2-201ENST00000258781 BPIFB4P59827 614 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 NCOA4Q13772 614 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 TAF3Q5VWG9 929 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 PXYLP1Q8TE99 480 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 TAF4BQ92750 862 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 ELMO3Q96BJ8 720 aa29.7■■■□□ 2.34
CCM2-201ENST00000258781 A0A087WZ62 844 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 ZEB2O60315 1214 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 PGK1P00558 417 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 MMEP08473 750 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 CLTAP09496 248 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 RHOXF2BP0C7M4 288 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 GJA9P57773 515 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 CUL2Q13617 745 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 CFAP221Q4G0U5 840 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 EEF1DP3Q658K8 133 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 ZNF677Q86XU0 584 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 MMGT1Q8N4V1 131 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 ARHGEF26Q96DR7 871 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 RHOXF2Q9BQY4 288 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 FDXACB1Q9BRP7 624 aaPredicted RBP29.69■■■□□ 2.34
CCM2-201ENST00000258781 CDT1Q9H211 546 aa29.69■■■□□ 2.34
CCM2-201ENST00000258781 APOBEC3GQ9HC16 384 aaKnown RBP29.69■■■□□ 2.34
CCM2-201ENST00000258781 RRN3P2A6NIE6 340 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 MYL3P08590 195 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 NOP14P78316 857 aaKnown RBP29.68■■■□□ 2.34
CCM2-201ENST00000258781 AMHR2Q16671 573 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 ARID3AQ99856 593 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 BEGAINQ9BUH8 593 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 IMPG2Q9BZV3 1241 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 ZNF446Q9NWS9 450 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 STXBP5LQ9Y2K9 1186 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 IQCF3P0C7M6 154 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 RARBP10826 455 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 GPC5P78333 572 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 DUOXA2Q1HG44 320 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 MARCH8Q5T0T0 291 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 SMYD5Q6GMV2 418 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 SPOPLQ6IQ16 392 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 PEX26Q7Z412 305 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 PNKPQ96T60 521 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 CCDC94Q9BW85 323 aaPredicted RBP29.68■■■□□ 2.34
CCM2-201ENST00000258781 ACP6Q9NPH0 428 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 PCDHB2Q9Y5E7 798 aa29.68■■■□□ 2.34
CCM2-201ENST00000258781 TRIP12Q14669 1992 aaPredicted RBP29.67■■■□□ 2.34
CCM2-201ENST00000258781 TARSL2A2RTX5 802 aaKnown RBP29.67■■■□□ 2.34
CCM2-201ENST00000258781 ACO1P21399 889 aaKnown RBP29.67■■■□□ 2.34
CCM2-201ENST00000258781 POU5F1Q01860 360 aaKnown RBP29.67■■■□□ 2.34
CCM2-201ENST00000258781 DAAM2Q86T65 1068 aa29.67■■■□□ 2.34
CCM2-201ENST00000258781 SPATA4Q8NEY3 305 aa29.67■■■□□ 2.34
CCM2-201ENST00000258781 PBKQ96KB5 322 aa29.67■■■□□ 2.34
CCM2-201ENST00000258781 UPF3AQ9H1J1 476 aaKnown RBP29.67■■■□□ 2.34
CCM2-201ENST00000258781 OSGEPQ9NPF4 335 aa29.67■■■□□ 2.34
CCM2-201ENST00000258781 PACSIN2Q9UNF0 486 aaPredicted RBP29.67■■■□□ 2.34
CCM2-201ENST00000258781 TRIM17Q9Y577 477 aa29.67■■■□□ 2.34
CCM2-201ENST00000258781 B4GALT4O60513 344 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 IL18RAPO95256 599 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 VTNP04004 478 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 MCF2P10911 925 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 PURAQ00577 322 aaKnown RBP29.66■■■□□ 2.34
CCM2-201ENST00000258781 CC2D1AQ6P1N0 951 aaPredicted RBP29.66■■■□□ 2.34
CCM2-201ENST00000258781 THNSL1Q8IYQ7 743 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 ABCB6Q9NP58 842 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 CNTN6Q9UQ52 1028 aa29.66■■■□□ 2.34
CCM2-201ENST00000258781 HAS3O00219 553 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 BUB1BO60566 1050 aaPredicted RBP29.65■■■□□ 2.34
CCM2-201ENST00000258781 ADAMTS4O75173 837 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 ASS1P00966 412 aaKnown RBP29.65■■■□□ 2.34
CCM2-201ENST00000258781 C2orf54Q08AI8 447 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 MFSD10Q14728 455 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 WDR93Q6P2C0 686 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 NT5DC3Q86UY8 548 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 ZNF410Q86VK4 478 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 MTMR12Q9C0I1 747 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 WBP1LQ9NX94 342 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 SCN10AQ9Y5Y9 1956 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 ZRANB2O95218 330 aaKnown RBP eCLIP29.65■■■□□ 2.34
CCM2-201ENST00000258781 GNASQ5JWF2 1037 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 HNRNPLLQ8WVV9 542 aaKnown RBP29.65■■■□□ 2.34
CCM2-201ENST00000258781 FAM212AQ96EL1 285 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 GOLPH3Q9H4A6 298 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 SETD4Q9NVD3 440 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 NUB1Q9Y5A7 615 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 PTCH2Q9Y6C5 1203 aa29.65■■■□□ 2.34
CCM2-201ENST00000258781 MTA2O94776 668 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms