RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TET3O43151 1660 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ENC1O14682 589 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TOMM70O94826 608 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CAP2P40123 477 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TAP1Q03518 808 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ITGA9Q13797 1035 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ZCWPW2Q504Y3 356 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ALFQ53S48 1182 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 AGMOQ6ZNB7 445 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 IDO2Q6ZQW0 420 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ZNF677Q86XU0 584 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CD302Q8IX05 232 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 NOC3LQ8WTT2 800 aaKnown RBP8.19□□□□□ -1.1
GPNMB-201ENST00000258733 REXO5Q96IC2 774 aaKnown RBP8.19□□□□□ -1.1
GPNMB-201ENST00000258733 SELENOSQ9BQE4 189 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 UNKQ9C0B0 810 aaKnown RBP8.19□□□□□ -1.1
GPNMB-201ENST00000258733 STON1Q9Y6Q2 735 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 SLC12A8A0AV02 714 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 UFL1O94874 794 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 GRK2P25098 689 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 KRT32Q14532 448 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 MTF1Q14872 753 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 SGCAQ16586 387 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 NFIL3Q16649 462 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 GSTA3Q16772 222 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 VARS2Q5ST30 1063 aaKnown RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 FAM171BQ6P995 826 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 B3GNT6Q6ZMB0 384 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 KRT28Q7Z3Y7 464 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 FNIP1Q8TF40 1166 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 NELFBQ8WX92 580 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ANKS1AQ92625 1134 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ZNF333Q96JL9 665 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ACAD9Q9H845 621 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 POLD4Q9HCU8 107 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ATP13A1Q9HD20 1204 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 CEP72Q9P209 647 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ZNF624Q9P2J8 865 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 NKX1-2Q9UD57 310 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 TRPS1Q9UHF7 1281 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 FBXO10Q9UK96 956 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 CPSF1Q10570 1443 aaKnown RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 A0A087WZG4 1122 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 SMIM31A0A1B0GVY4 71 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 RASA1P20936 1047 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 LRPAP1P30533 357 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ATP6V1E1P36543 226 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 USP14P54578 494 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ADAM17P78536 824 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 GLE1Q53GS7 698 aaKnown RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 DALRD3Q5D0E6 543 aaKnown RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 ZBTB41Q5SVQ8 909 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 OR7E24Q6IFN5 339 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 BEND4Q6ZU67 534 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 NKAIN3Q8N8D7 197 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 OR6P1Q8NGX9 317 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 PYROXD1Q8WU10 500 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 FAR2Q96K12 515 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 MNTQ99583 582 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 C19orf43Q9BQ61 176 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 KATNAL1Q9BW62 490 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 HAUS4Q9H6D7 363 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 LY9Q9HBG7 655 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 INTS9Q9NV88 658 aaKnown RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 TRNAU1APQ9NX07 287 aaKnown RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 EHD3Q9NZN3 535 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 DBF4Q9UBU7 674 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-201ENST00000258733 TAGLN3Q9UI15 199 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 TSKSQ9UJT2 592 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 CACNG2Q9Y698 323 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 MAP3K19Q56UN5 1328 aa8.18□□□□□ -1.1
GPNMB-201ENST00000258733 INO80Q9ULG1 1556 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-201ENST00000258733 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-201ENST00000258733 ARHGAP6O43182 974 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 TRAPPC3O43617 180 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 F13A1P00488 732 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 EGFRP00533 1210 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 GLAP06280 429 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 TPBGLP0DKB5 382 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 CDH3P22223 829 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 VAMP1P23763 118 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 GTF2H1P32780 548 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 NLRP11P59045 1033 aaKnown RBP8.17□□□□□ -1.1
GPNMB-201ENST00000258733 PLCB3Q01970 1234 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 PTK2BQ14289 1009 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 ZNF658Q5TYW1 1059 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-201ENST00000258733 PGM2L1Q6PCE3 622 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 SLC4A10Q6U841 1118 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 TMPRSS9Q7Z410 1059 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 GPR141Q7Z602 305 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 HEATR4Q86WZ0 1026 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 RALGPS2Q86X27 583 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-201ENST00000258733 ANKRD13CQ8N6S4 541 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 ATP6V0D2Q8N8Y2 350 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 SLC44A1Q8WWI5 657 aa8.17□□□□□ -1.1
GPNMB-201ENST00000258733 INPP4AQ96PE3 977 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms