RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 SENP7Q9BQF6 1050 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 RRP15Q9Y3B9 282 aaKnown RBP16.76■□□□□ 0.27
RFX1-201ENST00000254325 QSER1Q2KHR3 1735 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 TNFRSF8P28908 595 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 EIF3BP55884 814 aaKnown RBP16.75■□□□□ 0.27
RFX1-201ENST00000254325 CLEC16AQ2KHT3 1053 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 RIOX2Q8IUF8 465 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 PLEKHO2Q8TD55 490 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 ANKRD65E5RJM6 399 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 USP2O75604 605 aaPredicted RBP16.75■□□□□ 0.27
RFX1-201ENST00000254325 MARCKSL1P49006 195 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 PTENP60484 403 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 SF3A3Q12874 501 aaKnown RBP eCLIP16.75■□□□□ 0.27
RFX1-201ENST00000254325 ZNF677Q86XU0 584 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 TRIM6Q9C030 488 aaPredicted RBP16.75■□□□□ 0.27
RFX1-201ENST00000254325 MYH11P35749 1972 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 AP3M2P53677 418 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 RTP1P59025 263 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 GUCY1A3Q02108 690 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 SLMAPQ14BN4 828 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 RHOT1Q8IXI2 618 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 MICALL1Q8N3F8 863 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 CGRRF1Q99675 332 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 COG5Q9UP83 839 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
RFX1-201ENST00000254325 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 ALG3Q92685 438 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 MTMR12Q9C0I1 747 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 ANAPC5Q9UJX4 755 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 NEFHP12036 1026 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 PHKA2P46019 1235 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 MOB2Q70IA6 237 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 TOM1L1O75674 476 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 WEE2P0C1S8 567 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 TGFB3P10600 412 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 PYGMP11217 842 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 GBP2P32456 591 aaPredicted RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 IRAK1P51617 712 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 MAGOHP61326 146 aaKnown RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 GPR162Q16538 588 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.274e-6■□□□□ 10.6
RFX1-201ENST00000254325 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 ZNF112Q9UJU3 913 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 ADCY3O60266 1144 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 MYCNP04198 464 aaPredicted RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 VIMP08670 466 aaKnown RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 SLC1A1P43005 524 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 EFCAB12Q6NXP0 572 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 LBX2Q6XYB7 198 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 IPO4Q8TEX9 1081 aaKnown RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 MRRFQ96E11 262 aaKnown RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 PAIP2Q9BPZ3 127 aaKnown RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 MAK16Q9BXY0 300 aaKnown RBP16.74■□□□□ 0.27
RFX1-201ENST00000254325 KLHL11Q9NVR0 708 aa16.74■□□□□ 0.27
RFX1-201ENST00000254325 ACSL3O95573 720 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 CALB1P05937 261 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 CLCN3P51790 818 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 HADHQ16836 314 aaKnown RBP16.73■□□□□ 0.27
RFX1-201ENST00000254325 SLFN11Q7Z7L1 901 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 HELQQ8TDG4 1101 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 NTPCRQ9BSD7 190 aaKnown RBP16.73■□□□□ 0.27
RFX1-201ENST00000254325 PARVAQ9NVD7 372 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 ARHGAP28Q9P2N2 729 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 ASB14A6NK59 587 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 HSPA9P38646 679 aaKnown RBP16.73■□□□□ 0.27
RFX1-201ENST00000254325 KRT17Q04695 432 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 ATF7IP2Q5U623 682 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 LRIG3Q6UXM1 1119 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
RFX1-201ENST00000254325 TAOK1Q7L7X3 1001 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 APBB1IPQ7Z5R6 666 aaPredicted RBP16.73■□□□□ 0.27
RFX1-201ENST00000254325 TRAPPC12Q8WVT3 735 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 BTBD7Q9P203 1132 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 OGTO15294 1046 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 CLTAP09496 248 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 HAUS1Q96CS2 278 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 DNAI2Q9GZS0 605 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 HOMER3Q9NSC5 361 aa16.73■□□□□ 0.27
RFX1-201ENST00000254325 PI4K2BG5E9Z4 385 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 MED7O43513 233 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 COILP38432 576 aaPredicted RBP16.72■□□□□ 0.27
RFX1-201ENST00000254325 DYNLT1P63172 113 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 LAMTOR4Q0VGL1 99 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 SGSM1Q2NKQ1 1148 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 WDR72Q3MJ13 1102 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 MCOLN2Q8IZK6 566 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 RASSF4Q9H2L5 321 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 PGAP2Q9UHJ9 254 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 TELO2Q9Y4R8 837 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 EP400Q96L91 3159 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms