RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TADA2AO75478 443 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 NPTXRO95502 500 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 VCXQ9H320 206 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 NOVA2Q9UNW9 492 aaKnown RBP15.86■□□□□ 0.13
UBE4B-201ENST00000253251 A0A087WUV0 522 aaPredicted RBP15.86■□□□□ 0.13
UBE4B-201ENST00000253251 PSMD3O43242 534 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 CTSHP09668 335 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 PAPOLAP51003 745 aaKnown RBP15.86■□□□□ 0.13
UBE4B-201ENST00000253251 KIAA1755Q5JYT7 1200 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 MMS22LQ6ZRQ5 1243 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 SH3TC2Q8TF17 1288 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 PLAAQ9Y263 795 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 HOXA2O43364 376 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 KLRC1P26715 233 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 PMS2P54278 862 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 KIF9Q9HAQ2 790 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 BFARQ9NZS9 450 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 PHF2O75151 1096 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 MX2P20592 715 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 SAT1P21673 171 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 CDR2Q01850 454 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 TAF1BQ53T94 588 aaPredicted RBP15.86■□□□□ 0.13
UBE4B-201ENST00000253251 ATG16L1Q676U5 607 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 ACAD10Q6JQN1 1059 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 C4orf22Q6V702 233 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 VSIG10LQ86VR7 867 aa15.86■□□□□ 0.13
UBE4B-201ENST00000253251 A1CFQ9NQ94 594 aaKnown RBP15.86■□□□□ 0.13
UBE4B-201ENST00000253251 ADM5C9JUS6 153 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 GPC4O75487 556 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 RECQLP46063 649 aaPredicted RBP15.85■□□□□ 0.13
UBE4B-201ENST00000253251 E2F4Q16254 413 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 KLC3Q6P597 504 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 ATP11CQ8NB49 1132 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 CFAP36Q96G28 342 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 NFASCO94856 1347 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 H3BRB1 525 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
UBE4B-201ENST00000253251 VGLL4Q14135 290 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 IQSEC1Q6DN90 963 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 KSR1Q8IVT5 923 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 TUT1Q9H6E5 874 aaKnown RBP15.85■□□□□ 0.13
UBE4B-201ENST00000253251 PPCSQ9HAB8 311 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 GPRC5CQ9NQ84 441 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 STAG3L1P0CL83 205 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 MCF2P10911 925 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 ERVK-24P63145 666 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 CYP24A1Q07973 514 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 AFG1LQ8WV93 481 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 GLIS2Q9BZE0 524 aaPredicted RBP15.85■□□□□ 0.13
UBE4B-201ENST00000253251 FAM96AQ9H5X1 160 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 DPP3Q9NY33 737 aa15.85■□□□□ 0.13
UBE4B-201ENST00000253251 CREB3O43889 395 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 SEPT6Q14141 434 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 FOXR2Q6PJQ5 311 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 EP400NLQ6ZTU2 488 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 NT5DC4Q86YG4 428 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 FHDC1Q9C0D6 1143 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 RABEP2Q9H5N1 569 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 ZBBXA8MT70 800 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 SNHG28P0DPA3 235 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 NCAPHQ15003 741 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 CBWD2Q8IUF1 395 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 SCG3Q8WXD2 468 aaKnown RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 FSD1LQ9BXM9 530 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 CARD9Q9H257 536 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 BLOC1S4Q9NUP1 217 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 UBIAD1Q9Y5Z9 338 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 ACSL3O95573 720 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 VDRP11473 427 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 LCP1P13796 627 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 CCT5P48643 541 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 TSNAXIP1Q2TAA8 658 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 RNF219Q5W0B1 726 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 GPAT2Q6NUI2 795 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 FEZF2Q8TBJ5 459 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 CPA5Q8WXQ8 436 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 RSRC1Q96IZ7 334 aaKnown RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 RSAD1Q9HA92 442 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 NAGPAQ9UK23 515 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 PMLP29590 882 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 AXLP30530 894 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 GPS1Q13098 491 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 TAF2Q6P1X5 1199 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 ZNF410Q86VK4 478 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 ARHGAP18Q8N392 663 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 FRMD8P1Q9BZ68 369 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 PLEKHA5Q9HAU0 1116 aa15.84■□□□□ 0.13
UBE4B-201ENST00000253251 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.84■□□□□ 0.13
UBE4B-201ENST00000253251 GNL1P36915 607 aaPredicted RBP15.83■□□□□ 0.13
UBE4B-201ENST00000253251 CLCN3P51790 818 aa15.83■□□□□ 0.13
UBE4B-201ENST00000253251 CENPCQ03188 943 aa15.83■□□□□ 0.13
UBE4B-201ENST00000253251 CBWD1Q9BRT8 395 aa15.83■□□□□ 0.13
UBE4B-201ENST00000253251 LSM8O95777 96 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms