RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 IMPG2Q9BZV3 1241 aa13.96□□□□□ -0.17
LSM8-201ENST00000249299 INTS2Q9H0H0 1204 aaKnown RBP13.96□□□□□ -0.17
LSM8-201ENST00000249299 GANQ9H2C0 597 aa13.96□□□□□ -0.17
LSM8-201ENST00000249299 NXF3Q9H4D5 531 aaKnown RBP13.96□□□□□ -0.17
LSM8-201ENST00000249299 BRCA2P51587 3418 aa13.96□□□□□ -0.17
LSM8-201ENST00000249299 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.18
LSM8-201ENST00000249299 PHACTR2O75167 634 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 NOL4O94818 638 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 WNT7BP56706 349 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 GCNT1Q02742 428 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 BIRC3Q13489 604 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 NCOA4Q13772 614 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 TSR1Q2NL82 804 aaKnown RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 ZNF598Q86UK7 904 aaKnown RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 RPUSD2Q8IZ73 545 aaKnown RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 BEST2Q8NFU1 509 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 OR5B17Q8NGF7 314 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 TAS1R2Q8TE23 839 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 NAA15Q9BXJ9 866 aaKnown RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 STK33Q9BYT3 514 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 WNT8AQ9H1J5 351 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 FAM207AQ9NSI2 230 aaPredicted RBP13.95□□□□□ -0.18
LSM8-201ENST00000249299 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
LSM8-201ENST00000249299 PTPRJQ12913 1337 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 SMIM28A0A1B0GU29 152 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 HOXA2O43364 376 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 MGEA5O60502 916 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 ASS1P00966 412 aaKnown RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 CCDC172P0C7W6 258 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 EN2P19622 333 aaPredicted RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 SLC9A1P19634 815 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 FECHP22830 423 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 TBXAS1P24557 533 aaPredicted RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 CASP14P31944 242 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 KRT9P35527 623 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 RBP5P82980 135 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 CDK17Q00537 523 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 TRPC3Q13507 836 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 MFSD5Q6N075 450 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 LRRC8AQ8IWT6 810 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 TMEM199Q8N511 208 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 LRRC52Q8N7C0 313 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 TC2NQ8N9U0 490 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 DBF4BQ8NFT6 615 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 BAP1Q92560 729 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 NT5C1BQ96P26 610 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 ZNHIT6Q9NWK9 470 aaKnown RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 AIPL1Q9NZN9 384 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
LSM8-201ENST00000249299 R3HCC1Q9Y3T6 440 aaKnown RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
LSM8-201ENST00000249299 ABHD14A-ACY1A0A1B0GW23 586 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 ENPP3O14638 875 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 VNN1O95497 513 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 NFICP08651 508 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 LRPAP1P30533 357 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 CYP2C18P33260 490 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 PNPLA4P41247 253 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 FXR1P51114 621 aaKnown RBP eCLIP13.93□□□□□ -0.18
LSM8-201ENST00000249299 MFAP3P55082 362 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 MEA1Q16626 185 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 AGMOQ6ZNB7 445 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
LSM8-201ENST00000249299 TTC39CQ8N584 583 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 TRIM44Q96DX7 344 aaPredicted RBP13.93□□□□□ -0.18
LSM8-201ENST00000249299 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
LSM8-201ENST00000249299 HTATIP2Q9BUP3 242 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 RSAD1Q9HA92 442 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 DPP3Q9NY33 737 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 HES2Q9Y543 173 aa13.93□□□□□ -0.18
LSM8-201ENST00000249299 ANO9A1A5B4 782 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 THP07101 528 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 FAM163BP0C2L3 166 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 P4HA1P13674 534 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 RAG1P15918 1043 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 ATF7P17544 494 aaPredicted RBP13.92□□□□□ -0.18
LSM8-201ENST00000249299 AKAP5P24588 427 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 ANXA13P27216 316 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 RPL9P32969 192 aaKnown RBP13.92□□□□□ -0.18
LSM8-201ENST00000249299 JAM2P57087 298 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 POLR2FP61218 127 aaKnown RBP13.92□□□□□ -0.18
LSM8-201ENST00000249299 IKBKEQ14164 716 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms