RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 A0A0A6YYK5 440 aaPredicted RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 LACTBL1A8MY62 500 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 RIOK3O14730 519 aaKnown RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 ABL1P00519 1130 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 GZMAP12544 262 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 ATICP31939 592 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 GRK4P32298 578 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 PDE6CP51160 858 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 OSTNP61366 133 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 YWHAEP62258 255 aaKnown RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 TFAMQ00059 246 aaKnown RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 IFI16Q16666 785 aaKnown RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 TMEM192Q8IY95 271 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 LNX1Q8TBB1 728 aaPredicted RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 ALS2CR12Q96Q35 445 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 NAPGQ99747 312 aaPredicted RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 PI4K2AQ9BTU6 479 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 SEZ6LQ9BYH1 1024 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 NOCTQ9UK39 431 aaKnown RBP15.25■□□□□ 0.03
SDF2-201ENST00000247020 GINS2Q9Y248 185 aa15.25■□□□□ 0.03
SDF2-201ENST00000247020 MYH10P35580 1976 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 FANCGO15287 622 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 CAND2O75155 1236 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 NPTXRO95502 500 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 STAU1O95793 577 aaKnown RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 INHAP05111 366 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 YARSP54577 528 aaKnown RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 GPIHBP1Q8IV16 184 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 GLYCTKQ8IVS8 523 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 NIF3L1Q9GZT8 377 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 APOBEC3GQ9HC16 384 aaKnown RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 TRIM10Q9UDY6 481 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 ITGA11Q9UKX5 1188 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 CST3P01034 146 aaPredicted RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 CYP11B1P15538 503 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 ACO1P21399 889 aaKnown RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 FGFR4P22455 802 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 USP8P40818 1118 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 CDR2Q01850 454 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 PTK7Q13308 1070 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 TMEM132DQ14C87 1099 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 JADE1Q6IE81 842 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 UBR7Q8N806 425 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 U2AF1L4Q8WU68 220 aaKnown RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 TMEM40Q8WWA1 233 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 SNX27Q96L92 541 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 TRIM6Q9C030 488 aaPredicted RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 CHST12Q9NRB3 414 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 PIN4Q9Y237 131 aaKnown RBP15.24■□□□□ 0.03
SDF2-201ENST00000247020 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 PCDHB2Q9Y5E7 798 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 CDY2AQ9Y6F7 541 aa15.24■□□□□ 0.03
SDF2-201ENST00000247020 ANKRD62A6NC57 917 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 CYP26A1O43174 497 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 SGPL1O95470 568 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 NFICP08651 508 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 TMEM253P0C7T8 217 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 ACLYP53396 1101 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 MGAT3Q09327 533 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 ITGA7Q13683 1181 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 PPP1R2P3Q6NXS1 205 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 C1orf127Q8N9H9 656 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 SENP6Q9GZR1 1112 aaPredicted RBP15.23■□□□□ 0.03
SDF2-201ENST00000247020 XYLT2Q9H1B5 865 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 ISCUQ9H1K1 167 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 JRKLQ9Y4A0 524 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 SQORQ9Y6N5 450 aa15.23■□□□□ 0.03
SDF2-201ENST00000247020 NCANO14594 1321 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 GRIN2DO15399 1336 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 MACROD2A1Z1Q3 448 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 MEFVO15553 781 aaPredicted RBP15.22■□□□□ 0.03
SDF2-201ENST00000247020 URI1O94763 535 aaPredicted RBP15.22■□□□□ 0.03
SDF2-201ENST00000247020 KRT5P13647 590 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 MYL6P60660 151 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 TCEAL1Q15170 157 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 PTGISQ16647 500 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 LHX8Q68G74 356 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 SPOPLQ6IQ16 392 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 NOP9Q86U38 636 aaKnown RBP15.22■□□□□ 0.03
SDF2-201ENST00000247020 SLC47A2Q86VL8 602 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 FAM228AQ86W67 206 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 RPUSD2Q8IZ73 545 aaKnown RBP15.22■□□□□ 0.03
SDF2-201ENST00000247020 TTC39CQ8N584 583 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 ARRDC4Q8NCT1 418 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 DDX1Q92499 740 aaKnown RBP15.22■□□□□ 0.03
SDF2-201ENST00000247020 GLT1D1Q96MS3 346 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 CNTN3Q9P232 1028 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 TFR2Q9UP52 801 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms